Detailed information NTG0570827

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MNY25_RS22260
• Genome accession: NZ_CP093283
• Coordinates: 4624560..4625585 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC-14-2-9
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4619560..4630585

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MNY25_RS22240 (MNY25_22240)	metJ	4620621..4620938 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MNY25_RS22245 (MNY25_22245)	yiiX	4621122..4621730 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
MNY25_RS22250 (MNY25_22250)	rpmE	4621791..4622003 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MNY25_RS22255 (MNY25_22255)	priA	4622206..4624404 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
MNY25_RS22260 (MNY25_22260)	cytR	4624560..4625585 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MNY25_RS22265 (MNY25_22265)	ftsN	4625677..4626636 (+)	960	WP_000068828.1	cell division protein FtsN	-
MNY25_RS22270 (MNY25_22270)	hslV	4626729..4627259 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MNY25_RS22275 (MNY25_22275)	hslU	4627269..4628600 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
MNY25_RS22280 (MNY25_22280)	menA	4628667..4629593 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MNY25_RS22285 (MNY25_22285)	rraA	4629686..4630171 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MNY25_RS22290 (MNY25_22290)	zapB	4630256..4630501 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=570827 MNY25_RS22260 WP_000644904.1 4624560..4625585(+) (cytR) [Escherichia coli strain EC-14-2-9]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=570827 MNY25_RS22260 WP_000644904.1 4624560..4625585(+) (cytR) [Escherichia coli strain EC-14-2-9]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628