Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | KJW29_RS30115 | Genome accession | NZ_CP075889 |
| Coordinates | 7517776..7519143 (+) | Length | 455 a.a. |
| NCBI ID | WP_087570273.1 | Uniprot ID | A0A1Y5K3Q9 |
| Organism | Paenibacillus agaridevorans strain HCL2020 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 7512776..7524143
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJW29_RS30100 | - | 7513705..7514694 (+) | 990 | WP_214627393.1 | Gfo/Idh/MocA family oxidoreductase | - |
| KJW29_RS30105 | - | 7514691..7515572 (+) | 882 | WP_214627394.1 | sugar phosphate isomerase/epimerase | - |
| KJW29_RS30110 | - | 7515609..7517153 (+) | 1545 | WP_214627395.1 | FAD-dependent oxidoreductase | - |
| KJW29_RS30115 | radA | 7517776..7519143 (+) | 1368 | WP_087570273.1 | DNA repair protein RadA | Machinery gene |
| KJW29_RS30120 | disA | 7519159..7520235 (+) | 1077 | WP_087570274.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| KJW29_RS30125 | pssA | 7520323..7521063 (+) | 741 | WP_108992827.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
| KJW29_RS30130 | - | 7522079..7523416 (+) | 1338 | WP_214627396.1 | extracellular solute-binding protein | - |
Sequence
Protein
Download Length: 455 a.a. Molecular weight: 49419.07 Da Isoelectric Point: 7.0431
>NTDB_id=570742 KJW29_RS30115 WP_087570273.1 7517776..7519143(+) (radA) [Paenibacillus agaridevorans strain HCL2020]
MAKIKTKFVCTECGNESAKWLGKCPGCQAWNTMVEEKETVVKTKGIGLSGIHTKEKPQSIIHIESGQEPRIETRMVELNR
VLGGGVVPGSLILVGGDPGIGKSTLLLQTSHALAVKGLKVLYISGEESVRQTKLRADRLGALTETLYVLCETNMEHINDA
IESIDPDFLVIDSIQTVYEPRVESAPGSVSQVRECTAHFMRTAKIKGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMNEDGLREVSNPSELFLSERPLGVSGSTVVASMEGTRPVLVELQALVATTNFPS
PRRMSTGIDHHRMALIIAVLEKRNGMFLQTQDAYLNVAGGVKLDEPAVDLAAAVSLASSFRDAPTKPYDVIFGEVGLTGE
VRAVSRAEQRVKEAEKLGFKRVIMPEKSLKGWKAPDGIEIIGVNTVAEALKAALG
MAKIKTKFVCTECGNESAKWLGKCPGCQAWNTMVEEKETVVKTKGIGLSGIHTKEKPQSIIHIESGQEPRIETRMVELNR
VLGGGVVPGSLILVGGDPGIGKSTLLLQTSHALAVKGLKVLYISGEESVRQTKLRADRLGALTETLYVLCETNMEHINDA
IESIDPDFLVIDSIQTVYEPRVESAPGSVSQVRECTAHFMRTAKIKGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMNEDGLREVSNPSELFLSERPLGVSGSTVVASMEGTRPVLVELQALVATTNFPS
PRRMSTGIDHHRMALIIAVLEKRNGMFLQTQDAYLNVAGGVKLDEPAVDLAAAVSLASSFRDAPTKPYDVIFGEVGLTGE
VRAVSRAEQRVKEAEKLGFKRVIMPEKSLKGWKAPDGIEIIGVNTVAEALKAALG
Nucleotide
Download Length: 1368 bp
>NTDB_id=570742 KJW29_RS30115 WP_087570273.1 7517776..7519143(+) (radA) [Paenibacillus agaridevorans strain HCL2020]
ATGGCCAAAATAAAAACGAAATTCGTATGCACCGAATGCGGCAACGAGTCGGCAAAGTGGCTGGGCAAATGCCCGGGCTG
CCAAGCTTGGAACACGATGGTGGAAGAAAAGGAAACCGTCGTGAAGACGAAGGGCATCGGTTTATCGGGAATCCATACGA
AAGAAAAACCACAATCGATCATACACATAGAAAGTGGGCAAGAGCCGCGCATCGAAACCCGGATGGTGGAGTTAAACCGT
GTGCTGGGAGGCGGCGTCGTGCCGGGCTCGCTCATATTGGTTGGCGGAGATCCGGGTATCGGCAAGTCTACGCTCTTGCT
GCAGACGTCGCATGCTTTGGCCGTCAAGGGACTGAAGGTGCTGTACATATCCGGGGAGGAATCCGTAAGGCAGACGAAGC
TGAGGGCGGATCGGCTCGGAGCGCTGACGGAAACATTATATGTGCTGTGCGAGACGAATATGGAGCATATTAATGATGCG
ATCGAATCCATAGATCCGGATTTCCTGGTGATCGACTCCATTCAGACCGTCTACGAACCGCGGGTCGAGTCGGCCCCCGG
AAGCGTGTCGCAGGTGAGGGAGTGCACGGCGCACTTCATGCGTACGGCGAAGATTAAAGGCATCGCTACCGTACTGGTCG
GCCACGTCACAAAGGAAGGCGCCATCGCCGGTCCACGTCTGCTGGAGCATATGGTGGACTGCGTGCTGTACTTCGAGGGC
GAACGGCATCATACATACCGGCTGCTGCGCGCGGTAAAGAACAGATTCGGCTCCACGAACGAGATCGGAATCTTCGAGAT
GAACGAGGACGGCCTGCGCGAAGTATCCAATCCGTCGGAGCTGTTCTTGTCGGAGCGGCCGCTCGGCGTATCGGGTTCGA
CGGTCGTGGCCAGCATGGAAGGCACGAGGCCTGTCCTGGTCGAGCTGCAGGCGCTTGTCGCGACGACGAATTTTCCGTCG
CCGAGGCGGATGTCGACAGGCATCGACCATCATCGGATGGCCCTTATTATCGCGGTGCTGGAAAAACGCAACGGGATGTT
TCTTCAGACGCAGGATGCCTATCTAAACGTTGCCGGCGGCGTAAAGCTCGACGAGCCTGCCGTCGATCTGGCCGCGGCAG
TCAGCCTGGCGTCCAGCTTCCGGGATGCGCCTACGAAGCCGTATGATGTTATTTTTGGAGAAGTGGGGCTGACGGGCGAG
GTCCGGGCGGTCTCCAGAGCGGAACAACGGGTAAAGGAAGCCGAGAAGCTCGGCTTCAAGCGGGTCATTATGCCGGAGAA
AAGTCTCAAGGGCTGGAAAGCGCCGGACGGAATCGAGATCATCGGCGTAAATACAGTAGCAGAAGCGTTAAAGGCAGCGC
TGGGATAG
ATGGCCAAAATAAAAACGAAATTCGTATGCACCGAATGCGGCAACGAGTCGGCAAAGTGGCTGGGCAAATGCCCGGGCTG
CCAAGCTTGGAACACGATGGTGGAAGAAAAGGAAACCGTCGTGAAGACGAAGGGCATCGGTTTATCGGGAATCCATACGA
AAGAAAAACCACAATCGATCATACACATAGAAAGTGGGCAAGAGCCGCGCATCGAAACCCGGATGGTGGAGTTAAACCGT
GTGCTGGGAGGCGGCGTCGTGCCGGGCTCGCTCATATTGGTTGGCGGAGATCCGGGTATCGGCAAGTCTACGCTCTTGCT
GCAGACGTCGCATGCTTTGGCCGTCAAGGGACTGAAGGTGCTGTACATATCCGGGGAGGAATCCGTAAGGCAGACGAAGC
TGAGGGCGGATCGGCTCGGAGCGCTGACGGAAACATTATATGTGCTGTGCGAGACGAATATGGAGCATATTAATGATGCG
ATCGAATCCATAGATCCGGATTTCCTGGTGATCGACTCCATTCAGACCGTCTACGAACCGCGGGTCGAGTCGGCCCCCGG
AAGCGTGTCGCAGGTGAGGGAGTGCACGGCGCACTTCATGCGTACGGCGAAGATTAAAGGCATCGCTACCGTACTGGTCG
GCCACGTCACAAAGGAAGGCGCCATCGCCGGTCCACGTCTGCTGGAGCATATGGTGGACTGCGTGCTGTACTTCGAGGGC
GAACGGCATCATACATACCGGCTGCTGCGCGCGGTAAAGAACAGATTCGGCTCCACGAACGAGATCGGAATCTTCGAGAT
GAACGAGGACGGCCTGCGCGAAGTATCCAATCCGTCGGAGCTGTTCTTGTCGGAGCGGCCGCTCGGCGTATCGGGTTCGA
CGGTCGTGGCCAGCATGGAAGGCACGAGGCCTGTCCTGGTCGAGCTGCAGGCGCTTGTCGCGACGACGAATTTTCCGTCG
CCGAGGCGGATGTCGACAGGCATCGACCATCATCGGATGGCCCTTATTATCGCGGTGCTGGAAAAACGCAACGGGATGTT
TCTTCAGACGCAGGATGCCTATCTAAACGTTGCCGGCGGCGTAAAGCTCGACGAGCCTGCCGTCGATCTGGCCGCGGCAG
TCAGCCTGGCGTCCAGCTTCCGGGATGCGCCTACGAAGCCGTATGATGTTATTTTTGGAGAAGTGGGGCTGACGGGCGAG
GTCCGGGCGGTCTCCAGAGCGGAACAACGGGTAAAGGAAGCCGAGAAGCTCGGCTTCAAGCGGGTCATTATGCCGGAGAA
AAGTCTCAAGGGCTGGAAAGCGCCGGACGGAATCGAGATCATCGGCGTAAATACAGTAGCAGAAGCGTTAAAGGCAGCGC
TGGGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
66.521 |
100 |
0.668 |
| radA | Streptococcus mitis NCTC 12261 |
58.628 |
99.341 |
0.582 |
| radA | Streptococcus pneumoniae Rx1 |
58.628 |
99.341 |
0.582 |
| radA | Streptococcus pneumoniae D39 |
58.628 |
99.341 |
0.582 |
| radA | Streptococcus pneumoniae R6 |
58.628 |
99.341 |
0.582 |
| radA | Streptococcus pneumoniae TIGR4 |
58.628 |
99.341 |
0.582 |
| radA | Streptococcus mitis SK321 |
58.628 |
99.341 |
0.582 |