Detailed information NTG0570096

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KK132_RS16775
• Genome accession: NZ_CP075681
• Coordinates: 3395143..3396306 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain C5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390143..3401306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KK132_RS16745 (KK132_16605)	-	3390407..3390826 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
KK132_RS16750 (KK132_16610)	comFC	3390900..3391589 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
KK132_RS16755 (KK132_16615)	-	3391595..3391879 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
KK132_RS16760 (KK132_16620)	comFA	3391937..3393322 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
KK132_RS16765 (KK132_16625)	-	3393431..3394279 (-)	849	WP_032876160.1	DegV family protein	-
KK132_RS16770 (KK132_16630)	degU	3394377..3395066 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KK132_RS16775 (KK132_16635)	degS	3395143..3396306 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
KK132_RS16780 (KK132_16640)	-	3396529..3397176 (+)	648	WP_007614107.1	YigZ family protein	-
KK132_RS16785 (KK132_16645)	-	3397181..3398362 (+)	1182	WP_032876157.1	LCP family protein	-
KK132_RS16790 (KK132_16650)	-	3398461..3399537 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
KK132_RS16795 (KK132_16655)	-	3399670..3400866 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=570096 KK132_RS16775 WP_007407484.1 3395143..3396306(-) (degS) [Bacillus velezensis strain C5]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=570096 KK132_RS16775 WP_007407484.1 3395143..3396306(-) (degS) [Bacillus velezensis strain C5]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951