Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   MMZ72_RS10095 Genome accession   NZ_CP093021
Coordinates   2176042..2176398 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain H09     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2171042..2181398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMZ72_RS10070 (MMZ72_10070) fabF 2171254..2172498 (+) 1245 WP_024918029.1 beta-ketoacyl-ACP synthase II -
  MMZ72_RS10075 (MMZ72_10075) pabC 2172498..2173313 (+) 816 WP_003110198.1 aminodeoxychorismate lyase -
  MMZ72_RS10080 (MMZ72_10080) mltG 2173319..2174368 (+) 1050 WP_004350892.1 endolytic transglycosylase MltG -
  MMZ72_RS10085 (MMZ72_10085) tmk 2174397..2175029 (+) 633 WP_058139283.1 dTMP kinase -
  MMZ72_RS10090 (MMZ72_10090) - 2175022..2176008 (+) 987 WP_024918032.1 DNA polymerase III subunit delta' -
  MMZ72_RS10095 (MMZ72_10095) pilZ 2176042..2176398 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  MMZ72_RS10100 (MMZ72_10100) - 2176413..2177189 (+) 777 WP_024918033.1 TatD family hydrolase -
  MMZ72_RS10105 (MMZ72_10105) - 2177415..2178548 (-) 1134 WP_024918034.1 aminotransferase class V-fold PLP-dependent enzyme -
  MMZ72_RS10110 (MMZ72_10110) - 2178634..2179272 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  MMZ72_RS10115 (MMZ72_10115) - 2179427..2180323 (+) 897 WP_024918035.1 radical SAM protein -
  MMZ72_RS10120 (MMZ72_10120) - 2180388..2181020 (+) 633 WP_241469660.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=569664 MMZ72_RS10095 WP_003091119.1 2176042..2176398(+) (pilZ) [Pseudomonas aeruginosa strain H09]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=569664 MMZ72_RS10095 WP_003091119.1 2176042..2176398(+) (pilZ) [Pseudomonas aeruginosa strain H09]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449