Detailed information NTG0569651

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: MMZ72_RS06805
• Genome accession: NZ_CP093021
• Coordinates: 1468814..1469818 (+)
• Length: 334 a.a.
• NCBI ID: WP_003113871.1
• Uniprot ID: A0A0H2ZEU1
• Organism: Pseudomonas aeruginosa strain H09
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1463814..1474818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MMZ72_RS06775 (MMZ72_06775)	fghA	1463906..1464757 (+)	852	WP_241469516.1	S-formylglutathione hydrolase	-
MMZ72_RS06780 (MMZ72_06780)	ispF	1464828..1465301 (+)	474	WP_003092346.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
MMZ72_RS06785 (MMZ72_06785)	truD	1465298..1466365 (+)	1068	WP_241469518.1	tRNA pseudouridine(13) synthase TruD	-
MMZ72_RS06790 (MMZ72_06790)	surE	1466353..1467102 (+)	750	WP_058140017.1	5'/3'-nucleotidase SurE	-
MMZ72_RS06795 (MMZ72_06795)	-	1467135..1467770 (+)	636	WP_003098558.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	-
MMZ72_RS06800 (MMZ72_06800)	-	1467816..1468709 (+)	894	WP_241469520.1	peptidoglycan DD-metalloendopeptidase family protein	-
MMZ72_RS06805 (MMZ72_06805)	rpoS	1468814..1469818 (+)	1005	WP_003113871.1	RNA polymerase sigma factor RpoS	Regulator
MMZ72_RS06810 (MMZ72_06810)	fdxA	1470244..1470567 (-)	324	WP_003119354.1	ferredoxin FdxA	-
MMZ72_RS06815 (MMZ72_06815)	mutS	1470634..1473201 (-)	2568	WP_024916105.1	DNA mismatch repair protein MutS	-
MMZ72_RS06820 (MMZ72_06820)	-	1473337..1474344 (-)	1008	WP_024916104.1	TolB family protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 38235.38 Da
• Isoelectric Point: 5.0478

>NTDB_id=569651 MMZ72_RS06805 WP_003113871.1 1468814..1469818(+) (rpoS) [Pseudomonas aeruginosa strain H09]
MALKKEGPEFDHDDEVLLLEPGIMLDESSADEQPSPRATPKATTSFSSKQHKHIDYTRALDATQLYLNEIGFSPLLTPEE
EVHFARLAQKGDPAGRKRMIESNLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIE
RAIMNQTRTIRLPIHVVKELNVYLRAARELTHKLDHEPSPEEIANLLEKPVAEVKRMLGLNERVTSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSESIDQWLTELTDKQREVVIRRFGLRGHESSTLEEVGQEIGLTRERVRQIQVEALKRLRE
ILEKNGLSSDALFQ

Nucleotide

• Length: 1005 bp

>NTDB_id=569651 MMZ72_RS06805 WP_003113871.1 1468814..1469818(+) (rpoS) [Pseudomonas aeruginosa strain H09]
ATGGCACTCAAAAAAGAAGGGCCGGAGTTTGACCACGATGATGAAGTGCTCCTTCTGGAGCCCGGCATCATGCTGGACGA
GTCGTCTGCCGACGAGCAGCCTTCTCCCCGGGCAACTCCAAAAGCCACCACTTCCTTCTCTTCCAAGCAACACAAGCACA
TCGACTACACGCGCGCGTTGGACGCAACGCAGCTGTATCTCAACGAAATCGGTTTCTCGCCCCTGTTGACGCCCGAAGAG
GAAGTGCACTTCGCTCGTTTGGCGCAGAAGGGCGATCCCGCTGGTCGGAAGCGGATGATCGAGAGCAACCTGCGGCTGGT
GGTGAAGATCGCCCGGCGCTATGTCAATCGCGGACTGTCCCTGCTCGACCTGATCGAGGAAGGCAACCTAGGCCTGATCC
GCGCCGTGGAGAAGTTCGATCCGGAGCGCGGATTCCGGTTCTCGACCTACGCCACCTGGTGGATCCGCCAGACCATCGAA
CGGGCCATCATGAACCAGACCCGGACCATTCGTTTGCCGATCCATGTGGTCAAGGAGCTCAACGTCTACCTGCGTGCGGC
GCGGGAACTGACCCACAAGCTCGACCACGAACCCTCCCCCGAAGAAATCGCCAACCTGCTGGAGAAGCCGGTCGCCGAGG
TCAAGCGCATGCTCGGCCTGAACGAACGGGTGACTTCGGTGGACGTCTCCCTTGGTCCGGACTCGGACAAGACCCTGCTG
GACACGCTCACCGACGATCGCCCGACCGATCCCTGCGAGCTGCTGCAGGATGACGATCTCAGCGAAAGTATCGACCAGTG
GCTGACGGAACTCACCGACAAGCAGCGTGAGGTGGTGATTCGCCGCTTCGGCTTGCGCGGGCACGAAAGCAGCACGCTGG
AAGAGGTCGGCCAGGAAATCGGCCTGACTCGCGAGCGGGTTCGTCAGATCCAGGTCGAGGCGTTGAAGCGCCTGCGGGAG
ATCCTGGAGAAGAACGGCCTGTCGAGTGACGCGCTGTTCCAGTGA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (179-253)

• Sigma-70 region 2 (Sigma70_r2) (99-168)

• Sigma-70, region 4 (Sigma70_r4) (267-320)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (61-94)

3D structure

• AlphaFold DB: A0A0H2ZEU1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	66.463	98.204	0.653