Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ATE38_RS00135 Genome accession   NZ_AP017377
Coordinates   31330..32130 (+) Length   266 a.a.
NCBI ID   WP_000088648.1    Uniprot ID   A0A0H2XG71
Organism   Staphylococcus aureus strain OC8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 26330..37130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATE38_RS00120 walK 26998..28824 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  ATE38_RS00125 yycH 28817..30151 (+) 1335 WP_001060131.1 two-component system activity regulator YycH -
  ATE38_RS00130 yycI 30152..30940 (+) 789 WP_001104172.1 two-component system regulatory protein YycI -
  ATE38_RS00135 vicX 31330..32130 (+) 801 WP_000088648.1 MBL fold metallo-hydrolase Regulator
  ATE38_RS00140 adsA 32358..34676 (+) 2319 WP_000645780.1 LPXTG-anchored adenosine synthase AdsA -
  ATE38_RS00145 rlmH 35044..35523 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ATE38_RS00150 - 35845..37101 (+) 1257 WP_000566670.1 DUF3578 domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=56955 ATE38_RS00135 WP_000088648.1 31330..32130(+) (vicX) [Staphylococcus aureus strain OC8]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=56955 ATE38_RS00135 WP_000088648.1 31330..32130(+) (vicX) [Staphylococcus aureus strain OC8]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGCAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477

Multiple sequence alignment