Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   KHS93_RS05750 Genome accession   NZ_CP075547
Coordinates   1121130..1121786 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain SN16-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1116130..1126786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHS93_RS05720 (KHS93_05720) oppF 1116659..1117576 (+) 918 WP_003155037.1 oligopeptide ABC transporter ATP-binding protein OppF -
  KHS93_RS05725 (KHS93_05725) - 1117683..1118870 (+) 1188 WP_003155036.1 putative glycoside hydrolase -
  KHS93_RS05730 (KHS93_05730) - 1118988..1119566 (+) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  KHS93_RS05735 (KHS93_05735) spx 1119745..1120140 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  KHS93_RS05740 (KHS93_05740) - 1120198..1120854 (-) 657 WP_003155033.1 TerC family protein -
  KHS93_RS05750 (KHS93_05750) mecA 1121130..1121786 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  KHS93_RS05755 (KHS93_05755) - 1121937..1123097 (+) 1161 WP_161503321.1 competence protein CoiA family protein -
  KHS93_RS05760 (KHS93_05760) pepF 1123325..1125154 (+) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  KHS93_RS05765 (KHS93_05765) - 1125192..1125359 (-) 168 WP_003155026.1 hypothetical protein -
  KHS93_RS05770 (KHS93_05770) spxH 1125645..1126547 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=569444 KHS93_RS05750 WP_003155032.1 1121130..1121786(+) (mecA) [Bacillus amyloliquefaciens strain SN16-1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=569444 KHS93_RS05750 WP_003155032.1 1121130..1121786(+) (mecA) [Bacillus amyloliquefaciens strain SN16-1]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCTTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895