Detailed information NTG0569113

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LJF86_RS22170
• Genome accession: NZ_CP093011
• Coordinates: 4585426..4586409 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain 131
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4580426..4591409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJF86_RS22140 (LJF86_22140)	-	4580694..4580801 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LJF86_RS22145 (LJF86_22145)	yhjV	4581277..4582548 (+)	1272	WP_001545666.1	amino acid permease	-
LJF86_RS22150 (LJF86_22150)	-	4582565..4583572 (-)	1008	WP_001262467.1	HipA domain-containing protein	-
LJF86_RS22155 (LJF86_22155)	-	4583572..4583883 (-)	312	WP_001312177.1	HipA N-terminal domain-containing protein	-
LJF86_RS22160 (LJF86_22160)	-	4583868..4584191 (-)	324	WP_000563102.1	helix-turn-helix transcriptional regulator	-
LJF86_RS22165 (LJF86_22165)	dppF	4584416..4585429 (-)	1014	WP_000103572.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LJF86_RS22170 (LJF86_22170)	amiE	4585426..4586409 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
LJF86_RS22175 (LJF86_22175)	dppC	4586420..4587322 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LJF86_RS22180 (LJF86_22180)	dppB	4587332..4588351 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LJF86_RS22185 (LJF86_22185)	dppA	4588658..4590265 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=569113 LJF86_RS22170 WP_001196477.1 4585426..4586409(-) (amiE) [Escherichia coli strain 131]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=569113 LJF86_RS22170 WP_001196477.1 4585426..4586409(-) (amiE) [Escherichia coli strain 131]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404