Detailed information NTG0569093

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LJF86_RS18390
• Genome accession: NZ_CP093011
• Coordinates: 3838407..3839432 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 131
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3833407..3844432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJF86_RS18370 (LJF86_18370)	metJ	3834592..3834909 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LJF86_RS18375 (LJF86_18375)	yiiX	3834969..3835577 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
LJF86_RS18380 (LJF86_18380)	rpmE	3835638..3835850 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LJF86_RS18385 (LJF86_18385)	priA	3836053..3838251 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
LJF86_RS18390 (LJF86_18390)	cytR	3838407..3839432 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
LJF86_RS18395 (LJF86_18395)	ftsN	3839524..3840483 (+)	960	WP_000068834.1	cell division protein FtsN	-
LJF86_RS18400 (LJF86_18400)	hslV	3840576..3841106 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LJF86_RS18405 (LJF86_18405)	hslU	3841116..3842447 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
LJF86_RS18410 (LJF86_18410)	menA	3842514..3843440 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LJF86_RS18415 (LJF86_18415)	rraA	3843533..3844018 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LJF86_RS18420 (LJF86_18420)	zapB	3844103..3844348 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=569093 LJF86_RS18390 WP_000644908.1 3838407..3839432(+) (cytR) [Escherichia coli strain 131]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=569093 LJF86_RS18390 WP_000644908.1 3838407..3839432(+) (cytR) [Escherichia coli strain 131]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625