Detailed information NTG0569022

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MM176_RS21840
• Genome accession: NZ_CP092973
• Coordinates: 4550227..4551252 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WCHEC005215
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4545227..4556252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MM176_RS21820 (MM176_21840)	metJ	4546288..4546605 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MM176_RS21825 (MM176_21845)	yiiX	4546789..4547397 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
MM176_RS21830 (MM176_21850)	rpmE	4547458..4547670 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MM176_RS21835 (MM176_21855)	priA	4547873..4550071 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
MM176_RS21840 (MM176_21860)	cytR	4550227..4551252 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MM176_RS21845 (MM176_21865)	ftsN	4551344..4552303 (+)	960	WP_094885480.1	cell division protein FtsN	-
MM176_RS21850 (MM176_21870)	hslV	4552396..4552926 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MM176_RS21855 (MM176_21875)	hslU	4552936..4554267 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
MM176_RS21860 (MM176_21880)	menA	4554334..4555260 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MM176_RS21865 (MM176_21885)	rraA	4555353..4555838 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MM176_RS21870 (MM176_21890)	zapB	4555923..4556168 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=569022 MM176_RS21840 WP_000644904.1 4550227..4551252(+) (cytR) [Escherichia coli strain WCHEC005215]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=569022 MM176_RS21840 WP_000644904.1 4550227..4551252(+) (cytR) [Escherichia coli strain WCHEC005215]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628