Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KIL00_RS22080 Genome accession   NZ_CP075344
Coordinates   390802..390942 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 385802..395942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS22075 srfAB 387735..390710 (+) 2976 Protein_353 surfactin non-ribosomal peptide synthetase SrfAB -
  KIL00_RS22080 comS 390802..390942 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=568960 KIL00_RS22080 WP_225910706.1 390802..390942(+) (comS) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=568960 KIL00_RS22080 WP_225910706.1 390802..390942(+) (comS) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978