Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   KIL00_RS06350 Genome accession   NZ_CP075344
Coordinates   1229761..1230882 (+) Length   373 a.a.
NCBI ID   WP_235091746.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 1224761..1235882
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS06315 (KIL00_06315) yjbB 1225402..1226619 (+) 1218 WP_072592593.1 MFS transporter -
  KIL00_RS06320 (KIL00_06320) yjbC 1226784..1227362 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  KIL00_RS06325 (KIL00_06325) spx 1227543..1227938 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  KIL00_RS06330 (KIL00_06330) yjbE 1227981..1228637 (-) 657 WP_014479447.1 TerC family protein -
  KIL00_RS06335 (KIL00_06335) - 1228807..1228947 (+) 141 WP_119122854.1 hypothetical protein -
  KIL00_RS06340 (KIL00_06340) mecA 1228914..1229570 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  KIL00_RS06345 (KIL00_06345) - 1229565..1229687 (-) 123 WP_003245684.1 hypothetical protein -
  KIL00_RS06350 (KIL00_06350) coiA 1229761..1230882 (+) 1122 WP_235091746.1 competence protein CoiA Machinery gene
  KIL00_RS06355 (KIL00_06355) pepF 1231112..1232941 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  KIL00_RS06360 (KIL00_06360) - 1232979..1233146 (-) 168 WP_003244944.1 hypothetical protein -
  KIL00_RS06365 (KIL00_06365) spxH 1233461..1234360 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  KIL00_RS06370 (KIL00_06370) yjbI 1234357..1234755 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  KIL00_RS06375 (KIL00_06375) cwlQ 1235010..1235744 (-) 735 WP_014479451.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence

Protein


Download         Length: 373 a.a.        Molecular weight: 43795.83 Da        Isoelectric Point: 10.0622

>NTDB_id=568906 KIL00_RS06350 WP_235091746.1 1229761..1230882(+) (coiA) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEINRL
RLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=568906 KIL00_RS06350 WP_235091746.1 1229761..1230882(+) (coiA) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATTCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAATAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(12-363)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

100

0.984