Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KIL00_RS06230 Genome accession   NZ_CP075344
Coordinates   1207441..1207632 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1202441..1212632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS06200 (KIL00_06200) argF 1203304..1204263 (+) 960 WP_014479432.1 ornithine carbamoyltransferase -
  KIL00_RS06205 (KIL00_06205) yjzC 1204349..1204528 (+) 180 WP_003245356.1 YjzC family protein -
  KIL00_RS06210 (KIL00_06210) yjzD 1204575..1204760 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  KIL00_RS06215 (KIL00_06215) - 1205009..1205743 (+) 735 WP_014479433.1 hypothetical protein -
  KIL00_RS06220 (KIL00_06220) - 1205825..1206382 (+) 558 WP_014479435.1 hypothetical protein -
  KIL00_RS06225 (KIL00_06225) med 1206473..1207426 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  KIL00_RS06230 (KIL00_06230) comZ 1207441..1207632 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  KIL00_RS06235 (KIL00_06235) yjzB 1207662..1207901 (-) 240 WP_003232972.1 spore coat protein YjzB -
  KIL00_RS06240 (KIL00_06240) fabH 1208066..1209004 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KIL00_RS06245 (KIL00_06245) fabF 1209027..1210268 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  KIL00_RS06250 (KIL00_06250) yjaZ 1210344..1211129 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  KIL00_RS06255 (KIL00_06255) appD 1211320..1212306 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=568902 KIL00_RS06230 WP_046380930.1 1207441..1207632(+) (comZ) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=568902 KIL00_RS06230 WP_046380930.1 1207441..1207632(+) (comZ) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968