Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KIL00_RS04700 Genome accession   NZ_CP075344
Coordinates   925535..926329 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 920535..931329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS04670 (KIL00_04670) sxzA 921374..922405 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  KIL00_RS04675 (KIL00_04675) yfhB 922520..923401 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  KIL00_RS04680 (KIL00_04680) yfhC 923489..924073 (+) 585 WP_032723010.1 nitroreductase -
  KIL00_RS04685 (KIL00_04685) yfhD 924112..924303 (-) 192 WP_003233561.1 YfhD family protein -
  KIL00_RS04690 (KIL00_04690) yfhE 924370..924480 (-) 111 WP_003223230.1 YfhE family protein -
  KIL00_RS04695 (KIL00_04695) yfhF 924535..925446 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  KIL00_RS04700 (KIL00_04700) recX 925535..926329 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  KIL00_RS04705 (KIL00_04705) yfhH 926331..926645 (+) 315 WP_003244592.1 YfhH family protein -
  KIL00_RS04710 (KIL00_04710) yfhI 926788..927981 (+) 1194 WP_003243500.1 MFS transporter -
  KIL00_RS04715 (KIL00_04715) sspK 928013..928165 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KIL00_RS04720 (KIL00_04720) yfhJ 928290..928559 (+) 270 WP_003243789.1 YfhJ family protein -
  KIL00_RS04725 (KIL00_04725) yfhK 928704..929222 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  KIL00_RS04730 (KIL00_04730) spdL 929307..929639 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  KIL00_RS04735 (KIL00_04735) ephM 929626..930486 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=568894 KIL00_RS04700 WP_014479217.1 925535..926329(+) (recX) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=568894 KIL00_RS04700 WP_014479217.1 925535..926329(+) (recX) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992