Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MLE07_RS05175 Genome accession   NZ_CP092892
Coordinates   1040802..1041524 (-) Length   240 a.a.
NCBI ID   WP_020810865.1    Uniprot ID   A0ABD5LSS6
Organism   Agrobacterium tumefaciens strain LN-1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1035802..1046524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MLE07_RS05165 (MLE07_05165) - 1037272..1039704 (+) 2433 WP_243016503.1 ComEC/Rec2 family competence protein -
  MLE07_RS05170 (MLE07_05170) - 1039724..1040401 (-) 678 WP_243016504.1 glutathione S-transferase family protein -
  MLE07_RS05175 (MLE07_05175) dinR/lexA 1040802..1041524 (-) 723 WP_020810865.1 transcriptional repressor LexA Regulator
  MLE07_RS05180 (MLE07_05180) - 1041736..1042617 (+) 882 WP_243016505.1 VOC family protein -
  MLE07_RS05185 (MLE07_05185) kdsA 1042617..1043462 (+) 846 WP_107675511.1 3-deoxy-8-phosphooctulonate synthase -
  MLE07_RS05190 (MLE07_05190) eno 1043611..1044885 (+) 1275 WP_003502596.1 phosphopyruvate hydratase -
  MLE07_RS05195 (MLE07_05195) - 1045189..1045506 (+) 318 WP_003502598.1 septum formation initiator family protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 25960.88 Da        Isoelectric Point: 9.3311

>NTDB_id=568826 MLE07_RS05175 WP_020810865.1 1040802..1041524(-) (dinR/lexA) [Agrobacterium tumefaciens strain LN-1]
MLTRKQQELLLFIHERMKESGVPPSFDEMKDALDLASKSGIHRLITALEERGFIRRLPNRARALEVIKLPEAYTPGARPQ
RGFSPSVIEGSLGKPKASEAAPAPKTPANDLVGAVTVPVMGRIAAGVPISAIQNNTHDVAVPVDMLGSGEHYALEVKGDS
MIEAGIFDGDTVIIRNGNTANPGDIVVALVDDEEATLKRFRRKGASIALEAANPAYETRIFGPDRVKIQGKLVGLIRRYH

Nucleotide


Download         Length: 723 bp        

>NTDB_id=568826 MLE07_RS05175 WP_020810865.1 1040802..1041524(-) (dinR/lexA) [Agrobacterium tumefaciens strain LN-1]
ATGCTCACGCGCAAACAGCAGGAATTGCTTCTCTTCATTCATGAACGAATGAAAGAGTCCGGCGTGCCGCCATCCTTCGA
TGAAATGAAGGACGCACTCGATCTTGCCTCGAAATCTGGCATCCACCGCCTGATCACCGCCCTCGAAGAGCGCGGGTTTA
TTCGCCGGCTACCAAATAGAGCGCGAGCGCTGGAAGTCATCAAGCTGCCTGAGGCCTATACGCCGGGTGCAAGGCCGCAG
CGCGGCTTTTCGCCGAGCGTCATCGAAGGCAGCCTTGGCAAACCCAAGGCGTCGGAAGCGGCCCCTGCCCCCAAGACGCC
GGCCAATGATCTCGTCGGGGCCGTCACCGTGCCTGTCATGGGCCGCATCGCTGCCGGTGTGCCGATTTCCGCCATCCAGA
ACAATACCCACGATGTGGCCGTGCCTGTTGATATGCTGGGTTCGGGCGAACATTACGCTCTTGAGGTCAAGGGCGACTCG
ATGATCGAGGCCGGCATTTTTGATGGCGATACCGTCATCATCCGCAATGGCAATACGGCAAATCCGGGTGATATCGTCGT
AGCGCTGGTGGATGATGAGGAAGCCACCCTGAAGCGTTTCCGTCGCAAGGGCGCCTCCATTGCGCTCGAGGCGGCAAACC
CAGCCTATGAAACGCGTATTTTTGGACCGGACCGGGTGAAAATCCAGGGCAAGCTGGTCGGACTGATCCGCCGTTACCAT
TGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(2-63)

Peptidase S24-like (Peptidase_S24)

(118-233)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0ABD5LSS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

36.25

100

0.363