Detailed information NTG0568770

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KIP84_RS09620
• Genome accession: NZ_CP075323
• Coordinates: 2017947..2018702 (-)
• Length: 251 a.a.
• NCBI ID: WP_039761079.1
• Uniprot ID: -
• Organism: Acinetobacter sp. BHS4
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2012947..2023702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIP84_RS09590 (KIP84_09595)	-	2013254..2013694 (-)	441	WP_014206600.1	SRPBCC family protein	-
KIP84_RS09595 (KIP84_09600)	tadA	2013769..2014269 (-)	501	WP_213688358.1	tRNA adenosine(34) deaminase TadA	-
KIP84_RS09600 (KIP84_09605)	-	2014275..2015399 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
KIP84_RS09605 (KIP84_09610)	ung	2015396..2016109 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
KIP84_RS09610 (KIP84_09615)	-	2016163..2016759 (-)	597	WP_017386831.1	6-carboxytetrahydropterin synthase	-
KIP84_RS09615 (KIP84_09620)	gspK	2016987..2017946 (-)	960	WP_213688359.1	type II secretion system minor pseudopilin GspK	-
KIP84_RS09620 (KIP84_09625)	xcpW	2017947..2018702 (-)	756	WP_039761079.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KIP84_RS09625 (KIP84_09630)	xcpV	2018702..2019082 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
KIP84_RS09630 (KIP84_09635)	-	2019072..2019626 (-)	555	WP_039761075.1	type II secretion system protein	-
KIP84_RS09635 (KIP84_09640)	-	2019633..2020241 (-)	609	WP_213689836.1	TetR/AcrR family transcriptional regulator	-
KIP84_RS09640 (KIP84_09645)	-	2020278..2021051 (-)	774	WP_005069538.1	TatD family hydrolase	-
KIP84_RS09645 (KIP84_09650)	-	2021069..2021410 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
KIP84_RS09650 (KIP84_09655)	-	2021421..2022401 (-)	981	WP_039761071.1	DNA polymerase III subunit delta'	-
KIP84_RS09655 (KIP84_09660)	kdsB	2022415..2023176 (-)	762	WP_213688360.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28706.92 Da
• Isoelectric Point: 10.1556

>NTDB_id=568770 KIP84_RS09620 WP_039761079.1 2017947..2018702(-) (xcpW) [Acinetobacter sp. BHS4]
MIKNKSFRSPSSASRLAVRSEQMMRGYSKQSSSSSAQTKLRFVNPRSGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=568770 KIP84_RS09620 WP_039761079.1 2017947..2018702(-) (xcpW) [Acinetobacter sp. BHS4]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCCCGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCTAAGCAAAGCTCTTCGTCTTCCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGGTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTAAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAACATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	79.6	99.602	0.793