Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   KIP81_RS09490 Genome accession   NZ_CP075172
Coordinates   1922495..1923223 (+) Length   242 a.a.
NCBI ID   WP_243603404.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1917495..1928223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS09465 (KIP81_09455) rpmF 1917915..1918091 (+) 177 WP_003066947.1 50S ribosomal protein L32 -
  KIP81_RS09470 (KIP81_09460) rpmG 1918108..1918257 (+) 150 WP_002262412.1 50S ribosomal protein L33 -
  KIP81_RS09475 (KIP81_09465) - 1918429..1918686 (+) 258 WP_243602893.1 hypothetical protein -
  KIP81_RS09480 (KIP81_09470) treC 1918660..1920312 (-) 1653 WP_243602894.1 alpha,alpha-phosphotrehalase -
  KIP81_RS09485 (KIP81_09475) treP 1920324..1922300 (-) 1977 WP_243602895.1 PTS system trehalose-specific EIIBC component -
  KIP81_RS09490 (KIP81_09480) treR 1922495..1923223 (+) 729 WP_243603404.1 trehalose operon repressor Regulator
  KIP81_RS09495 (KIP81_09485) - 1923596..1924420 (-) 825 WP_243602896.1 class C sortase -
  KIP81_RS09500 (KIP81_09490) - 1924596..1926041 (-) 1446 WP_243602897.1 isopeptide-forming domain-containing fimbrial protein -

Sequence

Protein


Download         Length: 242 a.a.        Molecular weight: 27892.04 Da        Isoelectric Point: 9.2831

>NTDB_id=568283 KIP81_RS09490 WP_243603404.1 1922495..1923223(+) (treR) [Streptococcus equinus strain SheepZ001]
MKKYEHIYQILEKDITSGVYSAGDYLPTENELCTQYHVSRDTVRKALSLLAEARLIKKIHGSGSQVIKRETIDFPVSKLT
SYKELVDNFGINSKTNVISIDKLIVDEKLAALTGFSKNSLVWRVIRQRVVDGTASVIDIDYLDKKMVPNMTREIAEKSIY
DYLENQLHLSIAYAQKEITIDQLNDRDKLLLDIGAEHHVVSIKSKVYLANNQQFQFTESRHKLEKFRFVDFATRKNLLPT
KH

Nucleotide


Download         Length: 729 bp        

>NTDB_id=568283 KIP81_RS09490 WP_243603404.1 1922495..1923223(+) (treR) [Streptococcus equinus strain SheepZ001]
ATGAAGAAATACGAGCACATTTACCAAATTCTAGAAAAAGACATCACATCAGGAGTCTATTCAGCTGGTGATTATCTTCC
TACCGAAAATGAACTCTGTACACAATATCATGTCAGTCGCGACACCGTCCGTAAAGCATTGAGCTTGCTTGCCGAAGCAA
GGCTAATCAAGAAAATTCACGGCTCTGGTTCACAAGTTATCAAACGCGAAACGATTGACTTTCCTGTTTCAAAATTAACG
AGCTATAAAGAACTTGTCGACAATTTCGGTATTAATTCTAAAACCAACGTCATTTCCATTGATAAGCTGATTGTCGATGA
GAAACTTGCTGCGCTGACAGGATTCTCAAAAAACAGCTTAGTATGGCGCGTGATTCGCCAACGTGTGGTTGATGGCACAG
CTTCTGTCATTGATATTGATTATTTAGATAAAAAAATGGTGCCAAATATGACCCGAGAAATTGCAGAGAAATCTATTTAC
GATTATCTTGAAAATCAACTCCATCTGAGCATCGCTTATGCTCAAAAAGAAATTACCATCGACCAGCTTAACGACCGTGA
CAAACTACTTCTTGATATTGGTGCTGAGCACCACGTCGTTTCAATCAAATCAAAAGTCTACCTTGCCAATAATCAACAGT
TTCAGTTCACTGAAAGTAGACACAAACTTGAAAAATTCCGCTTTGTGGATTTTGCAACACGAAAAAACTTGCTACCAACC
AAACATTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(90-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

69.231

96.694

0.669