Detailed information NTG0568280

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: KIP81_RS09275
• Genome accession: NZ_CP075172
• Coordinates: 1870366..1872807 (-)
• Length: 813 a.a.
• NCBI ID: WP_243602879.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain SheepZ001
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1865366..1877807

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIP81_RS09255 (KIP81_09245)	-	1866222..1867040 (+)	819	WP_039691292.1	hypothetical protein	-
KIP81_RS09260 (KIP81_09250)	-	1867059..1868333 (+)	1275	WP_024344411.1	toxic anion resistance protein	-
KIP81_RS09265 (KIP81_09255)	hslO	1868447..1869313 (+)	867	WP_243602878.1	Hsp33 family molecular chaperone HslO	-
KIP81_RS09270 (KIP81_09260)	dusB	1869306..1870283 (+)	978	WP_027968310.1	tRNA dihydrouridine synthase DusB	-
KIP81_RS09275 (KIP81_09265)	clpC	1870366..1872807 (-)	2442	WP_243602879.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
KIP81_RS09280 (KIP81_09270)	-	1872804..1873265 (-)	462	WP_004233448.1	CtsR family transcriptional regulator	-
KIP81_RS09285 (KIP81_09275)	-	1873525..1873989 (+)	465	WP_243602880.1	small multi-drug export protein	-
KIP81_RS09290 (KIP81_09280)	tsf	1874375..1875412 (-)	1038	WP_024344414.1	translation elongation factor Ts	-
KIP81_RS09295 (KIP81_09285)	rpsB	1875519..1876286 (-)	768	WP_021143273.1	30S ribosomal protein S2	-

Sequence

Protein

• Length: 813 a.a.
• Molecular weight: 90200.85 Da
• Isoelectric Point: 6.3769

>NTDB_id=568280 KIP81_RS09275 WP_243602879.1 1870366..1872807(-) (clpC) [Streptococcus equinus strain SheepZ001]
MSEYSMKMQEVFSIAQFQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLSDVKNVQ
FLEQSKALKDVLAFAESICKVTDGTEIGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSVRLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEADGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYETFHNVIISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDETSATVQGLVKKKAPEALTDIDKAILEGDFKKATKLLKKSRKVVTREPAVVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKAYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTIQDKVEDKLSELILSGDLASGNTLK
IGVSKGQLKFDIA

Nucleotide

• Length: 2442 bp

>NTDB_id=568280 KIP81_RS09275 WP_243602879.1 1870366..1872807(-) (clpC) [Streptococcus equinus strain SheepZ001]
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGCATTGCCCAGTTTCAGGCTGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTTGCTGTTCATGATTCAGTGGCTGGCTTGACGTTTGCTGAATATCAAAATA
AGATTGCCTATGAAGAGTACGAAGCAGCAGCTGTTTTGGCTCTTGGTAAATCACCATTGTCAGATGTGAAAAATGTTCAA
TTTTTAGAACAATCAAAGGCTTTAAAAGACGTGTTGGCGTTTGCTGAGTCTATTTGCAAAGTAACTGACGGTACAGAAAT
CGGAACTGAGCACGTGCTTTATGCCATGCTCTTGAATCTTGATTTGTTTGCAACTCGTCTGCTTGAAGTTGCTGGATTCA
AAAATAAAGAAGATGGTGACTCAGTTCGCTTGCTTGATTTACGTAAATCATTGTCACGTAATGCTGGATTTACCAAAGAA
AAAATCAAAGCTATCCATGATCTTCGTAAGCCTAAAAAAGCTACGATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTGACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATCG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTAGTTGGTGAAGCT
GGTGTCGGAAAAACAGCTCTTGCTTATGGTTTGGCACAACGTATTGTCAATGGTGAAATTCCTTATGAACTCCAAGACAT
GCGTGTCTTAGAGCTCGATATGATGAGTGTTGTTGCGGGGACTCGTTTCCGTGGTGATTTCGAAGAACGCATGAACCAAA
TCATATCAGACATTGAAGCTGATGGTCATATTATTTTGTTTATCGATGAAGTCCACACTATCATGGGTTCTGGTTCAGGT
ATTGATAGTACTTTGGATGCTGCTAACATCTTAAAACCAGCTCTTGCGCGTGGTACACTTCACATGGTTGGTGCGACAAC
ACAAGAAGAATACCAAAAACACATTGAAAAAGATGCTGCGCTTTCTCGTCGTTTTGCTAAAATTACGATTGAAGAGCCAA
GTGTTGAAGATGCTTATCAGATTCTTCTTGGACTTAAGAAATCTTATGAAACATTCCACAATGTTATCATTTCTGATGAA
GCTGTGCTGACTGCTGTTAAAGCTGCACACCGCTATTTGACAAGCAAAAATCTTCCAGACTCAGCTATTGATTTGCTTGA
TGAAACGAGTGCAACAGTTCAAGGTCTTGTTAAGAAAAAAGCTCCTGAAGCGTTGACTGATATTGATAAAGCTATCTTGG
AAGGTGATTTCAAAAAAGCAACGAAATTGCTTAAAAAATCTCGCAAGGTTGTGACACGTGAGCCAGCAGTTGTCACTGAA
GATGACATTATGGCAACTCTTAGCCGTCTGTCAGGTATTCCTGTTGAGAAAATGACACAAGCCGATAGCAAGAAATATTT
GACGCTTGAAAAAGAACTTCACAAACGTGTTATCGGTCAAGATGCTGCGATTTCTGCTATCAGCCGTGCGATTCGCCGTA
ATCAGGCAGGTATTCGCACAGGTAAACGACCAATTGGTTCTTTCATGTTTTTAGGACCAACTGGGGTTGGTAAGACAGAG
CTTGCTAAAGCTTTGGCAGAACTTCTTTTTGATGATGAATCTGCGCTTATTCGTTTCGACATGTCTGAGTACATGGAAAA
ATTTGCGGCGAGTCGTCTTAACGGAGCGCCTCCAGGATATGTTGGCTATGAAGAAGGTGGAGAACTTACAGAAAAAGTTC
GTAACAAACCTTATTCAGTCCTTCTATTTGATGAGGTTGAAAAAGCTCACCCAGACATTTTCAATGTGCTTCTTCAAGTC
TTGGATGATGGTGTGTTGACAGACAGTCGTGGTCGTAAAGTTGACTTCTCAAACACTATTATTATCATGACGTCAAACCT
TGGTGCGACAGCTCTTCGTGATGATAAAACTGTTGGATTTGGTGCGCGTGATATGGCTCATGACTATGATGCTATGCAAA
AACGTATCATGGAAGAACTTAAGAAAGCTTATCGTCCTGAGTTTATCAACCGTATTGATGAAAAAGTTGTCTTCCACCAT
TTAACACAAGAAAATATGCGCGATGTTGTTAAAATTATGGTTAAACCATTAATTGCAACTTTGGCTGAAAAAGATATCAC
ACTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATATGACCCAGAAATGGGTGCTCGTCCACTTCGCC
GTACTATTCAAGATAAAGTCGAAGATAAACTATCTGAACTTATCCTATCAGGTGATTTGGCAAGCGGAAATACTCTTAAA
ATTGGTGTTTCAAAAGGTCAACTCAAATTTGATATTGCATAA

Domains

Predicted by InterproScan.

• Clp amino terminal domain, pathogenicity island component (Clp_N) (15-47)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (105-134)

• ATPase family associated with various cellular activities (AAA) (AAA) (235-367)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (721-800)

• AAA lid domain (AAA_lid_9) (374-459)

• AAA domain (Cdc48 subfamily) (AAA_2) (543-714)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	77.956	99.877	0.779
clpC	Streptococcus thermophilus LMG 18311	73.742	100	0.739
clpC	Streptococcus thermophilus LMD-9	73.62	100	0.738
clpC	Streptococcus pneumoniae TIGR4	67.98	99.877	0.679
clpC	Streptococcus pneumoniae Rx1	67.98	99.877	0.679
clpC	Streptococcus pneumoniae D39	67.98	99.877	0.679
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	49.458	100	0.506
clpC	Bacillus subtilis subsp. subtilis str. 168	43.976	100	0.449