Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   KIP81_RS03345 Genome accession   NZ_CP075172
Coordinates   637052..638854 (+) Length   600 a.a.
NCBI ID   WP_243603182.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 632052..643854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS03320 (KIP81_03325) queA 632760..633788 (-) 1029 WP_243603178.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  KIP81_RS03325 (KIP81_03330) - 633948..634454 (+) 507 WP_243603179.1 VIT1/CCC1 transporter family protein -
  KIP81_RS03330 (KIP81_03335) nagB 634587..635291 (+) 705 WP_243603180.1 glucosamine-6-phosphate deaminase -
  KIP81_RS03335 (KIP81_03340) - 635324..636040 (+) 717 WP_074566237.1 pseudouridine synthase -
  KIP81_RS03340 (KIP81_03345) coiA 636090..637052 (+) 963 WP_243603181.1 competence protein CoiA family protein Machinery gene
  KIP81_RS03345 (KIP81_03350) pepF 637052..638854 (+) 1803 WP_243603182.1 oligoendopeptidase F Regulator
  KIP81_RS03350 (KIP81_03355) - 638924..639439 (+) 516 WP_243603183.1 GNAT family N-acetyltransferase -
  KIP81_RS03355 (KIP81_03360) - 639441..640052 (+) 612 WP_243603184.1 HAD-IA family hydrolase -
  KIP81_RS03360 (KIP81_03365) - 640104..640805 (+) 702 WP_004230901.1 O-methyltransferase -
  KIP81_RS03365 (KIP81_03370) - 640874..641920 (+) 1047 WP_243603185.1 peptidyl-prolyl cis-trans isomerase -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69305.35 Da        Isoelectric Point: 4.6842

>NTDB_id=568244 KIP81_RS03345 WP_243603182.1 637052..638854(+) (pepF) [Streptococcus equinus strain SheepZ001]
MSDNRSHIDEKYKWDLSTVFVTDDAWEEALAELDSDLEDAKKFKGHLIESSKTLLDITESYLELSRRLEKVYVYASMKND
QDTTVAKYQEFEAKATTLYAKYSEVFAFYEPELMQLSQDDFAKFVAETPALSAYAHFFEKLFKRQAHVLSQKEEELLAGA
HEIFGAAGETFEILDNADIVFPVVLDDEGNEVQLTHGNFISLLESKNRDVRKAAYEAMYATYEQYQHTYAKTLQTNVKVH
NFDARVHHFKSAREAALSANFIPESVYDTLIERVNAHLPLLHRYVELRKKVLKLDDLKMYDIHTPLSEMDMSFTYEEALK
KAEEVLSVFGKDYSERVHRAFTERWIDVHVNKGKRSGAYSGGAYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTRET
QPYVYGDYSIFLAEIASTTNENILTETLLKEVDDDKARFAILNHYLDGFKGTIFRQAQFAEFEDIIHKADQNGEVLTSEY
LNSIYADLNEKYYGLSKEDNPEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKVVHGTSDDINRYLDYLKAGNSDYPL
NVIKKAGVDMTSSDYLDAAFKIFEERLNELETLVEKGAHL

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=568244 KIP81_RS03345 WP_243603182.1 637052..638854(+) (pepF) [Streptococcus equinus strain SheepZ001]
ATGTCAGATAATCGTAGTCATATTGATGAAAAGTATAAATGGGATTTGAGTACTGTCTTTGTGACAGATGATGCTTGGGA
AGAAGCACTAGCTGAGCTTGATTCAGATTTAGAAGATGCTAAAAAATTTAAAGGGCACTTGATTGAATCAAGTAAGACTT
TGCTCGATATCACTGAAAGTTATCTTGAATTGTCACGCCGTTTGGAAAAAGTTTATGTCTATGCGTCAATGAAAAATGAC
CAAGATACAACAGTTGCTAAATACCAAGAATTTGAAGCAAAAGCAACAACACTTTACGCCAAATACAGCGAAGTTTTTGC
ATTTTATGAACCAGAATTGATGCAATTATCTCAAGATGATTTCGCTAAATTCGTGGCTGAAACACCAGCACTTTCAGCTT
ATGCTCATTTCTTTGAAAAACTTTTCAAACGTCAAGCGCACGTCTTGTCACAAAAAGAAGAAGAGTTGTTAGCAGGTGCT
CACGAAATCTTTGGTGCAGCTGGAGAGACTTTTGAAATTTTAGATAATGCTGACATTGTCTTTCCTGTTGTTTTGGATGA
TGAGGGCAATGAAGTTCAACTAACTCATGGTAACTTCATCAGTCTTTTGGAATCAAAAAATCGCGATGTTCGAAAAGCGG
CTTACGAGGCTATGTATGCTACATACGAACAATATCAACATACTTATGCCAAAACACTTCAAACAAATGTAAAAGTTCAT
AACTTTGATGCTCGTGTTCACCATTTCAAATCAGCGCGTGAAGCAGCACTTTCAGCAAACTTCATTCCTGAATCTGTCTA
CGATACTTTGATTGAACGCGTGAATGCACACTTGCCATTGCTTCATCGTTATGTGGAACTTCGTAAGAAAGTTCTTAAAC
TTGATGATTTGAAAATGTATGATATTCATACACCTTTGTCTGAAATGGATATGAGTTTCACTTATGAGGAAGCTTTGAAA
AAAGCAGAAGAGGTTTTGTCTGTCTTTGGTAAAGATTATTCAGAACGTGTTCATCGAGCTTTCACAGAACGTTGGATTGA
CGTTCATGTCAACAAAGGAAAACGTTCAGGAGCTTATTCTGGTGGGGCTTATGATACAAATGCCTTTATGCTTTTGAATT
GGCAAGATACACTTGATAATCTTTTCACTTTGGTACACGAAACAGGGCACAGCCTTCATTCTACTTTTACGCGTGAAACT
CAACCATACGTTTACGGTGATTACAGCATTTTCTTGGCTGAAATTGCTTCAACGACGAATGAAAATATCTTAACAGAAAC
ACTCTTAAAAGAAGTTGATGATGACAAAGCACGCTTTGCAATTTTGAATCACTACTTGGATGGTTTCAAAGGGACTATTT
TCCGTCAAGCACAATTTGCTGAATTTGAAGATATTATTCATAAAGCTGACCAAAATGGTGAAGTTTTGACGAGTGAATAT
CTCAATAGCATTTATGCTGACTTAAATGAAAAATACTACGGACTCAGCAAAGAAGATAATCCAGAAATTCAATACGAATG
GGCACGCATTCCGCATTTCTACTATAATTACTATGTTTATCAATATGCGACAGGTTTTGCGGCAGCAAGTTATCTAGCTG
ACAAAGTAGTTCACGGTACATCAGATGACATTAACCGTTACCTTGATTATCTCAAGGCCGGTAATTCTGATTATCCGTTA
AATGTGATTAAAAAAGCTGGTGTGGACATGACAAGCAGTGATTATTTGGATGCTGCATTCAAGATTTTTGAAGAACGTCT
AAATGAATTAGAAACTTTGGTTGAAAAAGGGGCACACCTTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71

100

0.71