Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   A7S47_RS14080 Genome accession   NZ_CP075127
Coordinates   2866200..2866805 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain CFSAN044925     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2861200..2871805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7S47_RS14065 (A7S47_014065) helD 2861417..2863471 (-) 2055 WP_001524469.1 DNA helicase IV -
  A7S47_RS14070 (A7S47_014070) - 2863595..2864041 (+) 447 WP_001261222.1 YccF domain-containing protein -
  A7S47_RS14075 (A7S47_014075) yccS 2864060..2866213 (+) 2154 WP_000950881.1 YccS family putative transporter -
  A7S47_RS14080 (A7S47_014080) sxy/tfoX 2866200..2866805 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  A7S47_RS14085 (A7S47_014085) sulA 2867022..2867531 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  A7S47_RS14090 (A7S47_014090) ompA 2867888..2868940 (+) 1053 WP_001670727.1 porin OmpA -
  A7S47_RS14095 (A7S47_014095) matP 2869012..2869464 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  A7S47_RS14100 (A7S47_014100) - 2869650..2871410 (+) 1761 WP_000156448.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=567940 A7S47_RS14080 WP_001202375.1 2866200..2866805(-) (sxy/tfoX) [Salmonella enterica strain CFSAN044925]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=567940 A7S47_RS14080 WP_001202375.1 2866200..2866805(-) (sxy/tfoX) [Salmonella enterica strain CFSAN044925]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAGTGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751