Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | IOMTU133_RS02650 | Genome accession | NZ_AP017302 |
| Coordinates | 585242..585607 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain IOMTU 133 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 580242..590607
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IOMTU133_RS02620 (IOMTU133_0552) | pyrR | 580864..581376 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| IOMTU133_RS02625 (IOMTU133_0553) | ruvX | 581488..581922 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| IOMTU133_RS02630 (IOMTU133_0554) | - | 581922..582491 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| IOMTU133_RS02635 (IOMTU133_0555) | - | 582540..583433 (-) | 894 | WP_023112660.1 | energy transducer TonB | - |
| IOMTU133_RS02640 (IOMTU133_0556) | gshB | 583580..584533 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| IOMTU133_RS02645 (IOMTU133_0557) | pilG | 584788..585195 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| IOMTU133_RS02650 (IOMTU133_0558) | pilH | 585242..585607 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| IOMTU133_RS02655 (IOMTU133_0559) | - | 585658..586194 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| IOMTU133_RS02660 (IOMTU133_0560) | pilJ | 586279..588327 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| IOMTU133_RS02665 (IOMTU133_0561) | pilK | 588388..589263 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=56772 IOMTU133_RS02650 WP_003084587.1 585242..585607(+) (pilH) [Pseudomonas aeruginosa strain IOMTU 133]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=56772 IOMTU133_RS02650 WP_003084587.1 585242..585607(+) (pilH) [Pseudomonas aeruginosa strain IOMTU 133]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGCCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGCCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |