Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | LPE509_RS05500 | Genome accession | NC_020521 |
| Coordinates | 1234510..1234824 (+) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila subsp. pneumophila LPE509 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1229510..1239824
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPE509_RS05475 (LPE509_01180) | yajC | 1229547..1229882 (+) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
| LPE509_RS05480 (LPE509_01181) | secD | 1229904..1231760 (+) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| LPE509_RS05485 (LPE509_01182) | secF | 1231773..1232690 (+) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| LPE509_RS05490 (LPE509_01183) | - | 1232863..1233204 (-) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| LPE509_RS05495 (LPE509_01184) | hisC | 1233241..1234350 (-) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| LPE509_RS05500 (LPE509_01185) | lpp1978 | 1234510..1234824 (+) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LPE509_RS05505 (LPE509_01186) | lpp1977 | 1234763..1235569 (+) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| LPE509_RS05510 (LPE509_01187) | lpp1976 | 1235566..1236123 (+) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| LPE509_RS05515 (LPE509_01188) | - | 1236233..1237426 (+) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| LPE509_RS05520 (LPE509_01189) | - | 1237543..1238403 (-) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| LPE509_RS05525 (LPE509_01190) | - | 1238895..1239395 (+) | 501 | WP_015444348.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=56765 LPE509_RS05500 WP_010947713.1 1234510..1234824(+) (lpp1978) [Legionella pneumophila subsp. pneumophila LPE509]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=56765 LPE509_RS05500 WP_010947713.1 1234510..1234824(+) (lpp1978) [Legionella pneumophila subsp. pneumophila LPE509]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |