Detailed information NTG0567600

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MJ392_RS20810
• Genome accession: NZ_CP092639
• Coordinates: 4340200..4341225 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HS
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4335200..4346225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MJ392_RS20785 (MJ392_20785)	metJ	4335637..4335954 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MJ392_RS20790 (MJ392_20790)	yiiX	4336138..4336746 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
MJ392_RS20795 (MJ392_20795)	-	4336753..4337376 (+)	624	WP_000720774.1	TIGR02117 family protein	-
MJ392_RS20800 (MJ392_20800)	rpmE	4337431..4337643 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MJ392_RS20805 (MJ392_20805)	priA	4337846..4340044 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
MJ392_RS20810 (MJ392_20810)	cytR	4340200..4341225 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MJ392_RS20815 (MJ392_20815)	ftsN	4341317..4342276 (+)	960	WP_000068828.1	cell division protein FtsN	-
MJ392_RS20820 (MJ392_20820)	hslV	4342369..4342899 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MJ392_RS20825 (MJ392_20825)	hslU	4342909..4344240 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
MJ392_RS20830 (MJ392_20830)	menA	4344307..4345233 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MJ392_RS20835 (MJ392_20835)	rraA	4345326..4345811 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MJ392_RS20840 (MJ392_20840)	zapB	4345896..4346141 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=567600 MJ392_RS20810 WP_000644904.1 4340200..4341225(+) (cytR) [Escherichia coli strain HS]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=567600 MJ392_RS20810 WP_000644904.1 4340200..4341225(+) (cytR) [Escherichia coli strain HS]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628