Detailed information NTG0567578

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KIV13_RS16775
• Genome accession: NZ_CP075055
• Coordinates: 3426949..3428112 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain YYC
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3421949..3433112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIV13_RS16745 (KIV13_16745)	-	3422213..3422632 (-)	420	WP_007407479.1	TIGR03826 family flagellar region protein	-
KIV13_RS16750 (KIV13_16750)	comFC	3422706..3423395 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
KIV13_RS16755 (KIV13_16755)	-	3423401..3423685 (-)	285	WP_007407481.1	late competence development ComFB family protein	-
KIV13_RS16760 (KIV13_16760)	comFA	3423743..3425128 (-)	1386	WP_007407482.1	DEAD/DEAH box helicase	Machinery gene
KIV13_RS16765 (KIV13_16765)	-	3425237..3426085 (-)	849	WP_007407483.1	DegV family protein	-
KIV13_RS16770 (KIV13_16770)	degU	3426183..3426872 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KIV13_RS16775 (KIV13_16775)	degS	3426949..3428112 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
KIV13_RS16780 (KIV13_16780)	-	3428335..3428982 (+)	648	WP_007407485.1	YigZ family protein	-
KIV13_RS16785 (KIV13_16785)	-	3428987..3430207 (+)	1221	WP_032867080.1	LCP family protein	-
KIV13_RS16790 (KIV13_16790)	-	3430306..3431382 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
KIV13_RS16795 (KIV13_16795)	tuaH	3431515..3432711 (-)	1197	WP_032867083.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=567578 KIV13_RS16775 WP_007407484.1 3426949..3428112(-) (degS) [Bacillus velezensis strain YYC]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=567578 KIV13_RS16775 WP_007407484.1 3426949..3428112(-) (degS) [Bacillus velezensis strain YYC]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951