Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   KIV13_RS14810 Genome accession   NZ_CP075055
Coordinates   3036719..3036859 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain YYC     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3031719..3041859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV13_RS14785 (KIV13_14785) - 3032065..3032448 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  KIV13_RS14790 (KIV13_14790) comA 3032470..3033114 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  KIV13_RS14795 (KIV13_14795) comP 3033195..3035495 (-) 2301 WP_032867184.1 histidine kinase Regulator
  KIV13_RS14800 (KIV13_14800) comX 3035509..3035682 (-) 174 WP_012118314.1 competence pheromone ComX -
  KIV13_RS14805 (KIV13_14805) - 3035651..3036511 (-) 861 WP_157774448.1 polyprenyl synthetase family protein -
  KIV13_RS14810 (KIV13_14810) degQ 3036719..3036859 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  KIV13_RS14815 (KIV13_14815) - 3037325..3037666 (+) 342 WP_007408677.1 hypothetical protein -
  KIV13_RS14820 (KIV13_14820) - 3037673..3038896 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  KIV13_RS14825 (KIV13_14825) - 3039026..3040492 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  KIV13_RS14830 (KIV13_14830) - 3040510..3041061 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  KIV13_RS14835 (KIV13_14835) - 3041158..3041556 (-) 399 WP_003152031.1 YueI family protein -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=567572 KIV13_RS14810 WP_003152043.1 3036719..3036859(-) (degQ) [Bacillus velezensis strain YYC]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=567572 KIV13_RS14810 WP_003152043.1 3036719..3036859(-) (degQ) [Bacillus velezensis strain YYC]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCTATGAAAATTTCTTAA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891