Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KIV13_RS07305 Genome accession   NZ_CP075055
Coordinates   1393077..1393541 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain YYC     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1388077..1398541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV13_RS07285 (KIV13_07285) - 1388557..1390377 (+) 1821 WP_007409606.1 PAS domain-containing protein -
  KIV13_RS07290 (KIV13_07290) - 1390358..1391571 (-) 1214 Protein_1389 aminotransferase A -
  KIV13_RS07295 (KIV13_07295) - 1391772..1391933 (-) 162 WP_162889391.1 hypothetical protein -
  KIV13_RS07300 (KIV13_07300) cheV 1392122..1393033 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  KIV13_RS07305 (KIV13_07305) kre 1393077..1393541 (-) 465 WP_003154622.1 YkyB family protein Regulator
  KIV13_RS07310 (KIV13_07310) - 1393664..1394956 (-) 1293 WP_032868138.1 MFS transporter -
  KIV13_RS07315 (KIV13_07315) - 1395032..1395526 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  KIV13_RS07320 (KIV13_07320) - 1395601..1396464 (-) 864 WP_015239758.1 metallophosphoesterase -
  KIV13_RS07325 (KIV13_07325) fadH 1396609..1397373 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  KIV13_RS07330 (KIV13_07330) - 1397487..1398035 (+) 549 WP_007409614.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=567540 KIV13_RS07305 WP_003154622.1 1393077..1393541(-) (kre) [Bacillus velezensis strain YYC]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=567540 KIV13_RS07305 WP_003154622.1 1393077..1393541(-) (kre) [Bacillus velezensis strain YYC]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929