Detailed information NTG0567520

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KIV13_RS01960
• Genome accession: NZ_CP075055
• Coordinates: 392671..393819 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain YYC
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 387671..398819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIV13_RS01940 (KIV13_01940)	-	388092..388775 (-)	684	WP_032866951.1	ABC transporter ATP-binding protein	-
KIV13_RS01945 (KIV13_01945)	-	388790..390202 (-)	1413	WP_020955321.1	ABC transporter permease	-
KIV13_RS01950 (KIV13_01950)	-	390415..391098 (+)	684	WP_007410267.1	response regulator transcription factor	-
KIV13_RS01955 (KIV13_01955)	-	391085..392518 (+)	1434	WP_020955322.1	ATP-binding protein	-
KIV13_RS01960 (KIV13_01960)	rapC	392671..393819 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
KIV13_RS01965 (KIV13_01965)	phrC	393803..393922 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
KIV13_RS01970 (KIV13_01970)	-	394072..394182 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
KIV13_RS01975 (KIV13_01975)	-	394262..395626 (-)	1365	WP_032866947.1	aspartate kinase	-
KIV13_RS01980 (KIV13_01980)	ceuB	396040..396993 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
KIV13_RS01985 (KIV13_01985)	-	396983..397930 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
KIV13_RS01990 (KIV13_01990)	-	397924..398682 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=567520 KIV13_RS01960 WP_007410270.1 392671..393819(+) (rapC) [Bacillus velezensis strain YYC]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=567520 KIV13_RS01960 WP_007410270.1 392671..393819(+) (rapC) [Bacillus velezensis strain YYC]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCAGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568