Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KIV12_RS17590 Genome accession   NZ_CP075052
Coordinates   3438161..3438952 (-) Length   263 a.a.
NCBI ID   WP_217967416.1    Uniprot ID   -
Organism   Bacillus altitudinis strain LZP 02     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3433161..3443952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV12_RS17565 (KIV12_17565) - 3435594..3436577 (-) 984 WP_008341983.1 glycosyltransferase family 2 protein -
  KIV12_RS17570 (KIV12_17570) - 3436879..3437151 (-) 273 WP_217967414.1 YfhJ family protein -
  KIV12_RS17575 (KIV12_17575) - 3437268..3437417 (+) 150 WP_217967415.1 small, acid-soluble spore protein K -
  KIV12_RS17580 (KIV12_17580) - 3437443..3437616 (+) 174 WP_003217811.1 YpzG family protein -
  KIV12_RS17585 (KIV12_17585) - 3437843..3438157 (-) 315 WP_008341991.1 YfhH family protein -
  KIV12_RS17590 (KIV12_17590) recX 3438161..3438952 (-) 792 WP_217967416.1 recombination regulator RecX Regulator
  KIV12_RS17595 (KIV12_17595) - 3439048..3439944 (+) 897 WP_096881147.1 TIGR01777 family oxidoreductase -
  KIV12_RS17600 (KIV12_17600) - 3439997..3440107 (+) 111 WP_017358836.1 YfhE family protein -
  KIV12_RS17605 (KIV12_17605) - 3440169..3440324 (+) 156 WP_008341997.1 YfhD family protein -
  KIV12_RS17610 (KIV12_17610) - 3440361..3440948 (-) 588 WP_024720283.1 nitroreductase -
  KIV12_RS17615 (KIV12_17615) - 3441219..3442475 (+) 1257 WP_008341668.1 transcriptional regulator -
  KIV12_RS17620 (KIV12_17620) - 3442511..3442978 (-) 468 WP_024720282.1 thiol-disulfide oxidoreductase DCC family protein -
  KIV12_RS17625 (KIV12_17625) - 3443317..3443865 (-) 549 WP_039167961.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30644.06 Da        Isoelectric Point: 7.0789

>NTDB_id=567437 KIV12_RS17590 WP_217967416.1 3438161..3438952(-) (recX) [Bacillus altitudinis strain LZP 02]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAIDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=567437 KIV12_RS17590 WP_217967416.1 3438161..3438952(-) (recX) [Bacillus altitudinis strain LZP 02]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCATCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AGTTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGTTATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635