Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KIV12_RS16570 Genome accession   NZ_CP075052
Coordinates   3251499..3252449 (-) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain LZP 02     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3246499..3257449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV12_RS16545 (KIV12_16545) - 3246879..3247313 (+) 435 WP_035392499.1 hypothetical protein -
  KIV12_RS16550 (KIV12_16550) - 3247546..3248502 (-) 957 WP_007499147.1 LCP family protein -
  KIV12_RS16555 (KIV12_16555) - 3248840..3249784 (-) 945 WP_144678945.1 siderophore ABC transporter substrate-binding protein -
  KIV12_RS16560 (KIV12_16560) - 3249807..3250565 (-) 759 WP_019743341.1 ABC transporter ATP-binding protein -
  KIV12_RS16565 (KIV12_16565) - 3250556..3251506 (-) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  KIV12_RS16570 (KIV12_16570) ceuB 3251499..3252449 (-) 951 WP_039167438.1 ABC transporter permease Machinery gene
  KIV12_RS16575 (KIV12_16575) - 3252605..3252883 (-) 279 WP_039167440.1 barstar family protein -
  KIV12_RS16580 (KIV12_16580) - 3252946..3254115 (-) 1170 WP_058337508.1 MFS transporter -
  KIV12_RS16585 (KIV12_16585) - 3254258..3255697 (+) 1440 WP_217967383.1 PLP-dependent aminotransferase family protein -
  KIV12_RS16590 (KIV12_16590) - 3255728..3256210 (-) 483 WP_138278362.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=567432 KIV12_RS16570 WP_039167438.1 3251499..3252449(-) (ceuB) [Bacillus altitudinis strain LZP 02]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=567432 KIV12_RS16570 WP_039167438.1 3251499..3252449(-) (ceuB) [Bacillus altitudinis strain LZP 02]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTAATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGAGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAAAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494