Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KIV12_RS16190 Genome accession   NZ_CP075052
Coordinates   3170367..3170564 (-) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain LZP 02     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3165367..3175564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV12_RS16165 (KIV12_16165) - 3165728..3166708 (-) 981 WP_035392443.1 ABC transporter ATP-binding protein -
  KIV12_RS16170 (KIV12_16170) - 3166879..3167673 (-) 795 WP_217967363.1 DUF2268 domain-containing protein -
  KIV12_RS16175 (KIV12_16175) fabF 3167751..3168992 (-) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  KIV12_RS16180 (KIV12_16180) - 3169014..3169952 (-) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  KIV12_RS16185 (KIV12_16185) - 3170122..3170355 (+) 234 WP_008348506.1 hypothetical protein -
  KIV12_RS16190 (KIV12_16190) comZ 3170367..3170564 (-) 198 WP_008348507.1 ComZ family protein Regulator
  KIV12_RS16195 (KIV12_16195) med 3170576..3171541 (-) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  KIV12_RS16200 (KIV12_16200) - 3171632..3172207 (-) 576 WP_217967364.1 nad binding enzyme -
  KIV12_RS16205 (KIV12_16205) - 3172283..3173023 (-) 741 WP_007499048.1 hypothetical protein -
  KIV12_RS16210 (KIV12_16210) - 3173236..3173430 (+) 195 WP_008348514.1 YjzD family protein -
  KIV12_RS16215 (KIV12_16215) - 3173550..3174815 (-) 1266 WP_007499050.1 MFS transporter -
  KIV12_RS16220 (KIV12_16220) - 3174985..3175164 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=567428 KIV12_RS16190 WP_008348507.1 3170367..3170564(-) (comZ) [Bacillus altitudinis strain LZP 02]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=567428 KIV12_RS16190 WP_008348507.1 3170367..3170564(-) (comZ) [Bacillus altitudinis strain LZP 02]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662