Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KIV12_RS15020 Genome accession   NZ_CP075052
Coordinates   2947920..2948381 (+) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain LZP 02     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2942920..2953381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV12_RS14990 (KIV12_14990) fadH 2943051..2943815 (-) 765 WP_144678867.1 2,4-dienoyl-CoA reductase -
  KIV12_RS14995 (KIV12_14995) - 2943955..2944812 (+) 858 WP_217967264.1 metallophosphoesterase -
  KIV12_RS15000 (KIV12_15000) - 2944969..2945466 (+) 498 WP_041507380.1 L,D-transpeptidase family protein -
  KIV12_RS15005 (KIV12_15005) - 2945540..2946817 (+) 1278 WP_235701763.1 MFS transporter -
  KIV12_RS15010 (KIV12_15010) - 2946885..2947061 (-) 177 WP_172793301.1 hypothetical protein -
  KIV12_RS15015 (KIV12_15015) - 2947227..2947442 (+) 216 WP_217967266.1 hypothetical protein -
  KIV12_RS15020 (KIV12_15020) kre 2947920..2948381 (+) 462 WP_007498684.1 YkyB family protein Regulator
  KIV12_RS15025 (KIV12_15025) - 2948619..2949527 (-) 909 WP_024719666.1 chemotaxis protein -
  KIV12_RS15030 (KIV12_15030) - 2949601..2950911 (-) 1311 WP_217967267.1 MFS transporter -
  KIV12_RS15035 (KIV12_15035) - 2951037..2951576 (-) 540 WP_045035146.1 RDD family protein -
  KIV12_RS15040 (KIV12_15040) - 2951874..2952029 (+) 156 WP_155720694.1 hypothetical protein -
  KIV12_RS15045 (KIV12_15045) - 2952094..2952978 (-) 885 WP_017359428.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=567420 KIV12_RS15020 WP_007498684.1 2947920..2948381(+) (kre) [Bacillus altitudinis strain LZP 02]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=567420 KIV12_RS15020 WP_007498684.1 2947920..2948381(+) (kre) [Bacillus altitudinis strain LZP 02]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCAAAAGCGAATATGTCATTAAATCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771