Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KIV12_RS14900 Genome accession   NZ_CP075052
Coordinates   2929319..2929900 (-) Length   193 a.a.
NCBI ID   WP_110487267.1    Uniprot ID   -
Organism   Bacillus altitudinis strain LZP 02     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2924319..2934900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV12_RS14870 (KIV12_14870) - 2924351..2924842 (-) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -
  KIV12_RS14875 (KIV12_14875) mobB 2924835..2925362 (-) 528 WP_041507370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  KIV12_RS14880 (KIV12_14880) glp 2925344..2926618 (-) 1275 WP_217967259.1 gephyrin-like molybdotransferase Glp -
  KIV12_RS14885 (KIV12_14885) - 2926628..2927644 (-) 1017 WP_045034214.1 thiazole biosynthesis adenylyltransferase ThiF -
  KIV12_RS14890 (KIV12_14890) - 2927674..2928255 (-) 582 WP_188092750.1 molybdenum cofactor guanylyltransferase -
  KIV12_RS14895 (KIV12_14895) - 2928339..2929256 (+) 918 WP_217967260.1 sigmaE regulated sporulation protein -
  KIV12_RS14900 (KIV12_14900) rok 2929319..2929900 (-) 582 WP_110487267.1 hypothetical protein Regulator
  KIV12_RS14905 (KIV12_14905) - 2930383..2930841 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  KIV12_RS14910 (KIV12_14910) ahpA 2931118..2931660 (-) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  KIV12_RS14915 (KIV12_14915) - 2931932..2932741 (+) 810 WP_058337402.1 mechanosensitive ion channel family protein -
  KIV12_RS14920 (KIV12_14920) - 2932764..2933006 (-) 243 WP_024424725.1 YkuS family protein -
  KIV12_RS14925 (KIV12_14925) - 2933057..2934235 (-) 1179 WP_046527697.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21875.86 Da        Isoelectric Point: 9.7309

>NTDB_id=567419 KIV12_RS14900 WP_110487267.1 2929319..2929900(-) (rok) [Bacillus altitudinis strain LZP 02]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSTLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=567419 KIV12_RS14900 WP_110487267.1 2929319..2929900(-) (rok) [Bacillus altitudinis strain LZP 02]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGGGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCAACTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782