Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KIV12_RS10530 Genome accession   NZ_CP075052
Coordinates   2085380..2086183 (+) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain LZP 02     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2080380..2091183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV12_RS10515 (KIV12_10515) ahrC 2081403..2081852 (+) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  KIV12_RS10520 (KIV12_10520) recN 2081887..2083620 (+) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  KIV12_RS10525 (KIV12_10525) spoIVB 2083819..2085096 (+) 1278 WP_007501161.1 SpoIVB peptidase -
  KIV12_RS10530 (KIV12_10530) spo0A 2085380..2086183 (+) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  KIV12_RS10535 (KIV12_10535) - 2086633..2087733 (+) 1101 WP_024718885.1 Rap family tetratricopeptide repeat protein -
  KIV12_RS10540 (KIV12_10540) - 2087960..2088697 (+) 738 WP_024718886.1 glycerophosphodiester phosphodiesterase -
  KIV12_RS10545 (KIV12_10545) - 2088731..2088967 (-) 237 WP_217967003.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=567411 KIV12_RS10530 WP_008342226.1 2085380..2086183(+) (spo0A) [Bacillus altitudinis strain LZP 02]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=567411 KIV12_RS10530 WP_008342226.1 2085380..2086183(+) (spo0A) [Bacillus altitudinis strain LZP 02]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACGAAACAG
CCAAGTGTCATAATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCAATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCCTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884