Detailed information NTG0567361

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MKS87_RS11720
• Genome accession: NZ_CP092631
• Coordinates: 2283141..2284277 (+)
• Length: 378 a.a.
• NCBI ID: WP_068947494.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YB-15
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2278141..2289277

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKS87_RS11700 (MKS87_11700)	-	2278717..2280951 (+)	2235	WP_160245124.1	tail fiber domain-containing protein	-
MKS87_RS11705 (MKS87_11705)	blyA	2281129..2282232 (+)	1104	WP_072692676.1	N-acetylmuramoyl-L-alanine amidase BlyA	-
MKS87_RS11710 (MKS87_11710)	-	2282349..2282741 (+)	393	WP_017696898.1	hypothetical protein	-
MKS87_RS11715 (MKS87_11715)	-	2282762..2283013 (+)	252	WP_017696899.1	phage holin	-
MKS87_RS11720 (MKS87_11720)	rapC	2283141..2284277 (+)	1137	WP_068947494.1	Rap family tetratricopeptide repeat protein	Regulator
MKS87_RS11725 (MKS87_11725)	-	2284267..2284443 (+)	177	WP_068947493.1	aspartate phosphatase	-
MKS87_RS11730 (MKS87_11730)	-	2284484..2285734 (-)	1251	WP_072692677.1	UV damage repair protein UvrX	-
MKS87_RS11735 (MKS87_11735)	-	2285727..2286059 (-)	333	WP_041336419.1	YolD-like family protein	-
MKS87_RS11740 (MKS87_11740)	-	2286227..2287225 (+)	999	WP_068947491.1	hypothetical protein	-
MKS87_RS11745 (MKS87_11745)	-	2287381..2287470 (+)	90	WP_072692678.1	putative holin-like toxin	-
MKS87_RS11750 (MKS87_11750)	-	2287773..2288231 (-)	459	WP_071581355.1	YrhA family protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44847.08 Da
• Isoelectric Point: 5.0660

>NTDB_id=567361 MKS87_RS11720 WP_068947494.1 2283141..2284277(+) (rapC) [Bacillus subtilis strain YB-15]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTLNEERPKIS
DLLEKIESSQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=567361 MKS87_RS11720 WP_068947494.1 2283141..2284277(+) (rapC) [Bacillus subtilis strain YB-15]
TTGGAGCAGATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAGGTCGAGGAAGAAATAAGGCATATGAAAGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAGCTGATGCTGGACTACCTTGAACCAAAAACATTGAACGAAGAACGACCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGTAGTCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAAAGAGCTGAATTCCACTATAAAGTTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAC
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGATATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGAGATTATGGCAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (343-367)

• Tetratricopeptide repeat (TPR_8) (222-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.031	100	0.484
rapF	Bacillus subtilis subsp. subtilis str. 168	45.789	100	0.46