Detailed information NTG0567347

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MKS87_RS08610
• Genome accession: NZ_CP092631
• Coordinates: 1676509..1677498 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain YB-15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1671509..1682498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKS87_RS08595 (MKS87_08595)	acpP	1671706..1671939 (+)	234	WP_003154310.1	acyl carrier protein	-
MKS87_RS08600 (MKS87_08600)	rncS	1672079..1672828 (+)	750	WP_003232030.1	ribonuclease III	-
MKS87_RS08605 (MKS87_08605)	smc	1672929..1676489 (+)	3561	WP_173614084.1	chromosome segregation protein SMC	-
MKS87_RS08610 (MKS87_08610)	pilA	1676509..1677498 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
MKS87_RS08615 (MKS87_08615)	ylqB	1677534..1678019 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
MKS87_RS08620 (MKS87_08620)	ylxM	1678197..1678529 (+)	333	WP_003238590.1	putative DNA-binding protein	-
MKS87_RS08625 (MKS87_08625)	ffh	1678543..1679883 (+)	1341	WP_003232020.1	signal recognition particle protein	-
MKS87_RS08630 (MKS87_08630)	rpsP	1679989..1680261 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
MKS87_RS08635 (MKS87_08635)	ylqC	1680261..1680506 (+)	246	WP_173614085.1	KH domain-containing protein	-
MKS87_RS08640 (MKS87_08640)	ylqD	1680628..1681014 (+)	387	WP_015715875.1	YlqD family protein	-
MKS87_RS08645 (MKS87_08645)	rimM	1681019..1681543 (+)	525	WP_003232013.1	ribosome maturation factor RimM	-
MKS87_RS08650 (MKS87_08650)	trmD	1681540..1682271 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=567347 MKS87_RS08610 WP_003232026.1 1676509..1677498(+) (pilA) [Bacillus subtilis strain YB-15]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=567347 MKS87_RS08610 WP_003232026.1 1676509..1677498(+) (pilA) [Bacillus subtilis strain YB-15]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGTGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCAGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCCTTAACGAAGCTTGACGGTACGGCAAAGGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401