Detailed information NTG0567290

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: MKS87_RS01710
• Genome accession: NZ_CP092631
• Coordinates: 306082..307203 (+)
• Length: 373 a.a.
• NCBI ID: WP_080528887.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YB-15
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 301082..312203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKS87_RS01685 (MKS87_01685)	ycdA	301091..302155 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
MKS87_RS01690 (MKS87_01690)	-	302178..302309 (-)	132	WP_003246334.1	hypothetical protein	-
MKS87_RS01695 (MKS87_01695)	ycdB	302482..303900 (+)	1419	WP_173613878.1	YcdB/YcdC domain-containing protein	-
MKS87_RS01700 (MKS87_01700)	ycdC	304087..305448 (+)	1362	WP_173613879.1	YcdB/YcdC domain-containing protein	-
MKS87_RS01705 (MKS87_01705)	cwlK	305456..305959 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
MKS87_RS01710 (MKS87_01710)	rapF	306082..307203 (+)	1122	WP_080528887.1	response regulator aspartate phosphatase RapJ	Regulator
MKS87_RS01715 (MKS87_01715)	ycdF	307310..308086 (+)	777	WP_197196123.1	SDR family oxidoreductase	-
MKS87_RS01720 (MKS87_01720)	ycdG	308111..309796 (+)	1686	WP_197196122.1	alpha-glucosidase	-
MKS87_RS01725 (MKS87_01725)	znuA	309984..310943 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
MKS87_RS01730 (MKS87_01730)	znuC	310998..311693 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44399.35 Da
• Isoelectric Point: 4.9410

>NTDB_id=567290 MKS87_RS01710 WP_080528887.1 306082..307203(+) (rapF) [Bacillus subtilis strain YB-15]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWKDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=567290 MKS87_RS01710 WP_080528887.1 306082..307203(+) (rapF) [Bacillus subtilis strain YB-15]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGAATAAAGAGCGCGGCTGAATGGAAGG
ATGACATGTACTTGACGAAATTTCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (196-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405