Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AZKH_RS19005 Genome accession   NC_020516
Coordinates   4254697..4255092 (+) Length   131 a.a.
NCBI ID   WP_015437420.1    Uniprot ID   H0PT76
Organism   Azoarcus sp. KH32C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4249697..4260092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AZKH_RS18985 (AZKH_3830) mgtE 4249912..4251354 (+) 1443 WP_015437416.1 magnesium transporter -
  AZKH_RS18990 (AZKH_3831) hemL 4251417..4252697 (-) 1281 WP_015437417.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AZKH_RS18995 (AZKH_3832) thiE 4252767..4253396 (-) 630 WP_041656396.1 thiamine phosphate synthase -
  AZKH_RS19000 (AZKH_3833) - 4253389..4254336 (-) 948 WP_041656397.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  AZKH_RS19005 (AZKH_3834) pilG 4254697..4255092 (+) 396 WP_015437420.1 PleD family two-component system response regulator Regulator
  AZKH_RS19010 (AZKH_3835) - 4255110..4255475 (+) 366 WP_015437421.1 PleD family two-component system response regulator -
  AZKH_RS19015 (AZKH_3836) - 4255482..4255997 (+) 516 WP_015437422.1 chemotaxis protein CheW -
  AZKH_RS19020 (AZKH_3837) - 4256061..4258196 (+) 2136 WP_015437423.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14335.51 Da        Isoelectric Point: 6.4760

>NTDB_id=56721 AZKH_RS19005 WP_015437420.1 4254697..4255092(+) (pilG) [Azoarcus sp. KH32C]
MDLTGLKVMVIDDSNTIRRSAEIFLTQSGCQVLLAEDGFDALAKIADHHPDVIFVDIMMPRLDGYQTCALIKKNPQLAAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVATHAGRSSGQDH

Nucleotide


Download         Length: 396 bp        

>NTDB_id=56721 AZKH_RS19005 WP_015437420.1 4254697..4255092(+) (pilG) [Azoarcus sp. KH32C]
ATGGATCTAACCGGACTCAAGGTGATGGTGATCGACGACAGCAACACGATTCGTCGCAGCGCCGAAATCTTTCTCACGCA
GTCGGGCTGTCAGGTGCTGCTGGCCGAAGACGGCTTCGATGCGCTCGCCAAGATCGCCGACCATCACCCCGACGTGATCT
TCGTCGACATCATGATGCCGCGGCTCGACGGCTATCAGACCTGCGCGCTGATCAAGAAGAACCCGCAGCTCGCCGCGACG
CCGGTCATCATGCTGTCCTCGAAGGACGGGCTCTTCGACCGCGCCCGGGGCCGCATGGTGGGATCGGACGAATACCTCAC
CAAACCCTTCACCAAGGACAGCCTGCTCAAGGCGGTCGCCACCCACGCCGGACGCAGTTCCGGACAAGACCACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB H0PT76

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.213

93.13

0.626

Multiple sequence alignment