Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MKI52_RS09215 Genome accession   NZ_CP092581
Coordinates   1893044..1893862 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain VRMSSA-WC111     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1888044..1898862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKI52_RS09195 (MKI52_001823) - 1889137..1890114 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  MKI52_RS09200 (MKI52_001824) - 1890375..1891211 (-) 837 WP_000886462.1 membrane protein -
  MKI52_RS09205 (MKI52_001825) - 1891220..1892737 (-) 1518 WP_000535826.1 ABC transporter ATP-binding protein -
  MKI52_RS09210 (MKI52_001826) - 1892752..1893066 (-) 315 WP_000435806.1 YfhH family protein -
  MKI52_RS09215 (MKI52_001827) recX 1893044..1893862 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  MKI52_RS09220 (MKI52_001828) sgtB 1894122..1894931 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  MKI52_RS09225 (MKI52_001829) - 1895271..1895786 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  MKI52_RS09230 (MKI52_001830) - 1895917..1896078 (-) 162 WP_001005407.1 SE1561 family protein -
  MKI52_RS09235 (MKI52_001831) - 1896425..1896505 (+) 81 WP_100250272.1 hypothetical protein -
  MKI52_RS09240 (MKI52_001832) - 1896606..1897247 (-) 642 WP_001190816.1 hypothetical protein -
  MKI52_RS09245 (MKI52_001833) - 1897262..1897924 (-) 663 WP_000385047.1 hypothetical protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=567161 MKI52_RS09215 WP_001124422.1 1893044..1893862(-) (recX) [Staphylococcus aureus strain VRMSSA-WC111]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=567161 MKI52_RS09215 WP_001124422.1 1893044..1893862(-) (recX) [Staphylococcus aureus strain VRMSSA-WC111]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATTCAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996