Detailed information NTG0056708

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AZKH_RS03465
• Genome accession: NC_020516
• Coordinates: 775174..776247 (+)
• Length: 357 a.a.
• NCBI ID: WP_015434353.1
• Uniprot ID: H0PX53
• Organism: Azoarcus sp. KH32C
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 770174..781247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AZKH_RS03440 (AZKH_0700)	-	770952..771206 (-)	255	WP_015434348.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AZKH_RS03445 (AZKH_0701)	coaD	771232..771714 (-)	483	WP_015434349.1	pantetheine-phosphate adenylyltransferase	-
AZKH_RS03450 (AZKH_0702)	rsmD	771711..772250 (-)	540	WP_015434350.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AZKH_RS03455 (AZKH_0703)	-	772247..773653 (-)	1407	WP_015434351.1	pitrilysin family protein	-
AZKH_RS03460 (AZKH_0704)	-	773655..775028 (-)	1374	WP_041656784.1	pitrilysin family protein	-
AZKH_RS03465 (AZKH_0705)	pilA	775174..776247 (+)	1074	WP_015434353.1	signal recognition particle-docking protein FtsY	Machinery gene
AZKH_RS03470 (AZKH_0706)	-	776244..776909 (+)	666	WP_015434354.1	cell division ATP-binding protein FtsE	-
AZKH_RS03475 (AZKH_0707)	ftsX	776906..777808 (+)	903	WP_015434355.1	permease-like cell division protein FtsX	-
AZKH_RS03480 (AZKH_0708)	-	777948..779078 (+)	1131	WP_015434356.1	radical SAM protein	-
AZKH_RS03485 (AZKH_0709)	-	779097..780803 (-)	1707	WP_015434357.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 37707.34 Da
• Isoelectric Point: 6.3654

>NTDB_id=56708 AZKH_RS03465 WP_015434353.1 775174..776247(+) (pilA) [Azoarcus sp. KH32C]
MFGFLKKSAKPDPAAPAAPSAPEATPAPVSAPAPAPVQESTAEPAVKRSWAERLKAGLSRTRQQIGGGLANLFGLRKIDE
DLLEELETTLLMADCGVEATEHLLTELRRRWKRDKLETADQLQKALAEELLAILAPLEQPLDVSTHSPYIIMIAGVNGSG
KTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLMTWGERNNVTVIAQDGGDSAAVIFDAINAAKARGINVVLADTAGR
LPTQLHLMEEIAKVRRVIAKAEPSGPHEVLLVLDANIGQNALAQVKAFDAAIGVTGLVVTKLDGTAKGGVVAAIARQYPR
PLRFIGVGEGIDDLQPFHVKEFVDALFEPVAGAGAAA

Nucleotide

• Length: 1074 bp

>NTDB_id=56708 AZKH_RS03465 WP_015434353.1 775174..776247(+) (pilA) [Azoarcus sp. KH32C]
ATGTTTGGTTTCCTGAAGAAATCCGCAAAGCCCGATCCGGCGGCCCCCGCAGCCCCGTCGGCCCCCGAGGCGACGCCCGC
GCCCGTGTCGGCTCCCGCGCCCGCTCCTGTCCAGGAATCGACTGCCGAGCCGGCCGTCAAGCGTTCCTGGGCCGAGCGCC
TGAAGGCCGGGCTGAGCCGCACGCGCCAGCAGATCGGCGGCGGGCTCGCCAACCTTTTCGGTCTGCGCAAGATCGACGAG
GACCTGCTCGAGGAGCTCGAAACGACGCTTCTGATGGCCGATTGCGGCGTCGAGGCGACCGAGCATCTGCTCACCGAACT
GCGCAGGCGCTGGAAGCGCGACAAGCTCGAGACCGCCGACCAGTTGCAGAAGGCGCTCGCCGAGGAGCTGCTGGCGATTC
TTGCGCCGCTCGAGCAGCCGCTCGACGTGTCGACGCACTCGCCCTACATCATCATGATCGCGGGCGTGAACGGCTCGGGC
AAGACGACCTCGATCGGCAAGCTCGCGAAGTACTTCCAGTCACAGGGCAAGAGCGTGCTGCTGGCGGCGGGCGATACGTT
CCGCGCCGCGGCGCGCGAGCAGTTGATGACCTGGGGCGAGCGCAACAACGTCACGGTGATCGCGCAGGACGGCGGCGATT
CGGCGGCGGTGATCTTCGACGCGATCAACGCCGCGAAGGCACGCGGCATCAACGTCGTACTGGCGGATACCGCCGGGCGC
CTGCCGACGCAACTGCACCTGATGGAAGAGATCGCGAAGGTGCGCCGCGTGATCGCGAAGGCCGAGCCGAGCGGGCCGCA
CGAGGTGCTGCTCGTGCTCGACGCGAATATCGGCCAGAACGCGCTGGCGCAGGTGAAGGCCTTTGATGCCGCGATTGGTG
TGACGGGCCTGGTCGTGACCAAGCTCGACGGCACGGCGAAGGGCGGCGTCGTCGCGGCGATCGCCCGTCAGTATCCGCGT
CCGCTGCGCTTTATCGGCGTCGGCGAAGGGATCGACGACTTGCAGCCCTTCCACGTGAAGGAATTCGTCGACGCGCTGTT
CGAACCGGTCGCGGGAGCGGGCGCTGCGGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (65-130)

• SRP54-type protein, GTPase domain (SRP54) (149-347)

3D structure

• AlphaFold DB: H0PX53

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	61.721	94.398	0.583