Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | WQG_RS10250 | Genome accession | NC_020515 |
| Coordinates | 2204977..2205315 (-) | Length | 112 a.a. |
| NCBI ID | WP_015433471.1 | Uniprot ID | A0A179CX46 |
| Organism | Bibersteinia trehalosi USDA-ARS-USMARC-192 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2199977..2210315
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WQG_RS10215 (WQG_20580) | nlpD | 2199984..2201198 (+) | 1215 | WP_015433464.1 | murein hydrolase activator NlpD | - |
| WQG_RS10220 (WQG_20590) | - | 2201209..2201580 (+) | 372 | WP_015433465.1 | hypothetical protein | - |
| WQG_RS10225 (WQG_20600) | - | 2201633..2202196 (+) | 564 | WP_015433466.1 | DNA-3-methyladenine glycosylase I | - |
| WQG_RS10230 (WQG_20610) | - | 2202193..2202912 (+) | 720 | WP_015433467.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| WQG_RS10235 (WQG_20620) | psiE | 2202916..2203326 (+) | 411 | WP_015433468.1 | phosphate-starvation-inducible protein PsiE | - |
| WQG_RS10240 (WQG_20630) | nudF | 2203341..2203952 (+) | 612 | WP_015433469.1 | ADP-ribose diphosphatase | - |
| WQG_RS10245 (WQG_20640) | asd | 2204023..2204913 (-) | 891 | WP_015433470.1 | archaetidylserine decarboxylase | - |
| WQG_RS10250 (WQG_20650) | comEA/comE1 | 2204977..2205315 (-) | 339 | WP_015433471.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| WQG_RS10255 (WQG_20660) | - | 2205574..2206953 (+) | 1380 | WP_015433472.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| WQG_RS10260 (WQG_20670) | - | 2207009..2207410 (+) | 402 | WP_015433473.1 | MliC family protein | - |
| WQG_RS10265 (WQG_20680) | waaF | 2207421..2208458 (+) | 1038 | WP_015433474.1 | lipopolysaccharide heptosyltransferase II | - |
| WQG_RS10270 (WQG_20690) | hemB | 2208468..2209493 (+) | 1026 | WP_015433475.1 | porphobilinogen synthase | - |
| WQG_RS10275 (WQG_20700) | - | 2209503..2210000 (+) | 498 | WP_015433476.1 | YbhB/YbcL family Raf kinase inhibitor-like protein | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12223.04 Da Isoelectric Point: 8.0035
>NTDB_id=56702 WQG_RS10250 WP_015433471.1 2204977..2205315(-) (comEA/comE1) [Bibersteinia trehalosi USDA-ARS-USMARC-192]
MKKYLRIALSSLVAFCTLSALAQTQREATHTEPVAIEQVAQAQVQNVNLVNLNTATAAEIQDKLVGIGAKKAQAIVEYRE
KNGNFISLEQLTEVSGIGKATLDKNRDRLVLE
MKKYLRIALSSLVAFCTLSALAQTQREATHTEPVAIEQVAQAQVQNVNLVNLNTATAAEIQDKLVGIGAKKAQAIVEYRE
KNGNFISLEQLTEVSGIGKATLDKNRDRLVLE
Nucleotide
Download Length: 339 bp
>NTDB_id=56702 WQG_RS10250 WP_015433471.1 2204977..2205315(-) (comEA/comE1) [Bibersteinia trehalosi USDA-ARS-USMARC-192]
ATGAAAAAATATCTGCGTATTGCGCTTTCTTCCCTTGTGGCATTTTGTACGCTATCTGCTTTAGCACAAACGCAACGTGA
AGCAACACATACTGAACCGGTTGCTATTGAGCAAGTTGCGCAGGCTCAGGTACAGAATGTCAATTTAGTTAATCTGAATA
CAGCAACGGCGGCTGAAATTCAAGATAAATTAGTCGGTATTGGTGCGAAAAAAGCGCAAGCGATAGTAGAATATCGCGAG
AAAAATGGCAATTTTATTAGCCTTGAACAGCTCACGGAAGTTTCTGGTATTGGTAAAGCAACACTAGATAAGAACCGCGA
TCGCCTTGTATTAGAGTAA
ATGAAAAAATATCTGCGTATTGCGCTTTCTTCCCTTGTGGCATTTTGTACGCTATCTGCTTTAGCACAAACGCAACGTGA
AGCAACACATACTGAACCGGTTGCTATTGAGCAAGTTGCGCAGGCTCAGGTACAGAATGTCAATTTAGTTAATCTGAATA
CAGCAACGGCGGCTGAAATTCAAGATAAATTAGTCGGTATTGGTGCGAAAAAAGCGCAAGCGATAGTAGAATATCGCGAG
AAAAATGGCAATTTTATTAGCCTTGAACAGCTCACGGAAGTTTCTGGTATTGGTAAAGCAACACTAGATAAGAACCGCGA
TCGCCTTGTATTAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
62.281 |
100 |
0.634 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
56.122 |
87.5 |
0.491 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45 |
89.286 |
0.402 |