Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SAFDA_RS00120 Genome accession   NZ_AP014942
Coordinates   29977..30777 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain FDA209P     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24977..35777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAFDA_RS00105 (SAFDA_0019) walK 25639..27465 (+) 1827 WP_060829048.1 cell wall metabolism sensor histidine kinase WalK -
  SAFDA_RS00110 (SAFDA_0020) yycH 27458..28792 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  SAFDA_RS00115 - 28793..29581 (+) 789 Protein_20 two-component system regulatory protein YycI -
  SAFDA_RS00120 (SAFDA_0023) vicX 29977..30777 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  SAFDA_RS00125 (SAFDA_0024) adsA 31005..33323 (+) 2319 WP_000645751.1 LPXTG-anchored adenosine synthase AdsA -
  SAFDA_RS00130 (SAFDA_0026) rlmH 33691..34170 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SAFDA_RS00135 (SAFDA_0027) pycC 34211..35482 (+) 1272 WP_000368660.1 Pycsar phage resistance system cytidylate cyclase PycC -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=56678 SAFDA_RS00120 WP_000088649.1 29977..30777(+) (vicX) [Staphylococcus aureus strain FDA209P]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=56678 SAFDA_RS00120 WP_000088649.1 29977..30777(+) (vicX) [Staphylococcus aureus strain FDA209P]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment