Detailed information NTG0056656

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOK310_RS07310
• Genome accession: NC_020509
• Coordinates: 1506177..1507610 (-)
• Length: 477 a.a.
• NCBI ID: WP_015429560.1
• Uniprot ID: -
• Organism: Helicobacter pylori OK310
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1501177..1512610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOK310_RS07285 (HPOK310_1406)	recG	1502311..1504176 (-)	1866	WP_015429558.1	ATP-dependent DNA helicase RecG	-
HPOK310_RS07290 (HPOK310_1407)	-	1504258..1504611 (+)	354	WP_015429559.1	hypothetical protein	-
HPOK310_RS07295 (HPOK310_1408)	-	1504615..1505250 (+)	636	WP_000668051.1	outer membrane protein	-
HPOK310_RS07300 (HPOK310_1409)	-	1505247..1505999 (-)	753	WP_000767562.1	exodeoxyribonuclease III	-
HPOK310_RS07310 (HPOK310_1410)	comH	1506177..1507610 (-)	1434	WP_015429560.1	hypothetical protein	Machinery gene
HPOK310_RS07320 (HPOK310_1411)	dnaA	1507839..1509206 (-)	1368	WP_015429561.1	chromosomal replication initiator protein DnaA	-
HPOK310_RS07325 (HPOK310_1412)	-	1509358..1509894 (+)	537	WP_015429562.1	purine-nucleoside phosphorylase	-
HPOK310_RS07330 (HPOK310_1413)	-	1509941..1510180 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPOK310_RS07335 (HPOK310_1414)	glmS	1510181..1511974 (+)	1794	WP_015429563.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54632.61 Da
• Isoelectric Point: 7.4069

>NTDB_id=56656 HPOK310_RS07310 WP_015429560.1 1506177..1507610(-) (comH) [Helicobacter pylori OK310]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQMPSLNAPIQKPQNKPSSSQQSPQNFSYPEPKLGSKNPKNSLLQPLAT
PNKISSANEVKAPTNDTKPPLKHSLEDQENNLFIAPPTEKTLPNNTPNANINEHNESNENRDNVEKQAIRDPNIKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQIEPTFYETNELAYSSTRKSEVKQNELNL
NDKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=56656 HPOK310_RS07310 WP_015429560.1 1506177..1507610(-) (comH) [Helicobacter pylori OK310]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATTAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAGACAAGTTTTAGGCGTTT
ATAATATTTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCAGCTCATCGCAACAAT
CCCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAATAAGCTCCGCTAATGAAGTTAAAGCGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTTAGAAGA
TCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTCCCTAACAACACTCCTAACGCTAATATTAATGAAC
ACAATGAAAGCAATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGACCAGGCAATGCTATCTCATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATCAAATAG
AGCCGACTTTCTATGAAACCAACGAATTGGCTTATTCTTCCACACGAAAGAGTGAAGTTAAGCAAAATGAATTGAATTTG
AATGATAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTATGCATGGTTTTAGAAATAGAAGAGCAGCCACGAGCCAAAA
GCACGCCCTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.276	100	0.927