Detailed information NTG0056634

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPOK113_RS07430
• Genome accession: NC_020508
• Coordinates: 1532210..1533649 (-)
• Length: 479 a.a.
• NCBI ID: WP_015428409.1
• Uniprot ID: -
• Organism: Helicobacter pylori OK113
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1527210..1538649

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOK113_RS07405 (HPOK113_1438)	recG	1528338..1530209 (-)	1872	WP_015428405.1	ATP-dependent DNA helicase RecG	-
HPOK113_RS07410 (HPOK113_1439)	-	1530291..1530644 (+)	354	WP_015428406.1	hypothetical protein	-
HPOK113_RS07415 (HPOK113_1440)	-	1530648..1531283 (+)	636	WP_015428407.1	outer membrane protein	-
HPOK113_RS07420 (HPOK113_1441)	-	1531280..1532032 (-)	753	WP_015428408.1	exodeoxyribonuclease III	-
HPOK113_RS07430 (HPOK113_1442)	comH	1532210..1533649 (-)	1440	WP_015428409.1	hypothetical protein	Machinery gene
HPOK113_RS07440 (HPOK113_1443)	dnaA	1533878..1535245 (-)	1368	WP_015428410.1	chromosomal replication initiator protein DnaA	-
HPOK113_RS07445 (HPOK113_1444)	-	1535397..1535939 (+)	543	WP_015428411.1	purine-nucleoside phosphorylase	-
HPOK113_RS07450 (HPOK113_1445)	-	1535982..1536221 (+)	240	WP_000461832.1	DUF2443 domain-containing protein	-
HPOK113_RS07455 (HPOK113_1446)	glmS	1536222..1538015 (+)	1794	WP_015428412.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54832.72 Da
• Isoelectric Point: 6.6633

>NTDB_id=56634 HPOK113_RS07430 WP_015428409.1 1532210..1533649(-) (comH) [Helicobacter pylori OK113]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHSHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPESKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNIPNTDISENNESNENKDNVEKQATRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=56634 HPOK113_RS07430 WP_015428409.1 1532210..1533649(-) (comH) [Helicobacter pylori OK113]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACTCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTCCCTAATAACATCCCTAACACTGATATTA
GTGAAAACAATGAAAGCAATGAAAATAAGGATAATGTGGAAAAACAAGCCACTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCTAAACAAGACGACC
AAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCACGAG
CTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	97.286	100	0.973