Detailed information NTG0565999

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: JRY14_RS29475
• Genome accession: NZ_CP074714
• Coordinates: 5421092..5422441 (-)
• Length: 449 a.a.
• NCBI ID: WP_086412813.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain B13
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5416092..5427441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JRY14_RS29455 (JRY14_29400)	secA	5416418..5418925 (-)	2508	WP_000579387.1	preprotein translocase subunit SecA	-
JRY14_RS29460 (JRY14_29405)	raiA	5419199..5419741 (-)	543	WP_086412815.1	ribosome-associated translation inhibitor RaiA	-
JRY14_RS29465 (JRY14_29410)	cspC	5420064..5420261 (-)	198	WP_001990088.1	cold shock protein CspC	-
JRY14_RS29470 (JRY14_29415)	-	5420388..5421092 (-)	705	WP_086412814.1	ComF family protein	-
JRY14_RS29475 (JRY14_29420)	comFA	5421092..5422441 (-)	1350	WP_086412813.1	ATP-dependent helicase ComFA	Machinery gene
JRY14_RS29480 (JRY14_29425)	-	5422568..5424013 (-)	1446	WP_140159432.1	C40 family peptidase	-
JRY14_RS29485 (JRY14_29430)	-	5424162..5424476 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
JRY14_RS29490 (JRY14_29435)	-	5424649..5425491 (-)	843	WP_000684725.1	DegV family protein	-
JRY14_RS29495 (JRY14_29440)	-	5425728..5426363 (+)	636	WP_086412812.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51155.06 Da
• Isoelectric Point: 10.0028

>NTDB_id=565999 JRY14_RS29475 WP_086412813.1 5421092..5422441(-) (comFA) [Bacillus thuringiensis strain B13]
MVAGKQLLLDELSSDLQRELNDLKKKGEVVCVQGVKKKASKYVCQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECALLVRGIAERKREKNLNLLRWSGTLSTGQNLAAQGVIEAIKRKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVMVVDEIDAFPYCADQMLQYAVKQAM
KERAAHIYLTATPDETWKRKFRRGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKKQGMID

Nucleotide

• Length: 1350 bp

>NTDB_id=565999 JRY14_RS29475 WP_086412813.1 5421092..5422441(-) (comFA) [Bacillus thuringiensis strain B13]
ATGGTAGCGGGGAAACAGTTGCTATTAGACGAACTTTCTTCAGATTTACAGAGGGAATTAAATGATTTGAAAAAGAAGGG
AGAGGTCGTCTGTGTACAAGGTGTAAAAAAGAAGGCTTCTAAATATGTATGTCAGCGCTGTGGAAATATAGAACAGCGGC
TATTTGCGTCGTTTTTATGTAAAAGATGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTTTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTTAAACTTGTTACGGTGGAGCGGAACGTT
GTCTACTGGTCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCGAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTTCTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTGGATAAAGAAAAAGATGCAGTACTAGTCGTTGCAACCACGCATCAATTATTGCGTTATTATAGGGCGTTTC
ATGTCATGGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAGAGCGGCGCATATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAGAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGAGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAAAACAAGGAATGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.584	98.441	0.508