Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BSU6051_RS13360 | Genome accession | NC_020507 |
| Coordinates | 2652370..2652780 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. subtilis 6051-HGW | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2647736..2699226 | 2652370..2652780 | within | 0 |
Gene organization within MGE regions
Location: 2647736..2699226
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSU6051_RS13335 (BSU6051_25700) | yqeF | 2647903..2648634 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| BSU6051_RS13340 (BSU6051_25710) | cwlH | 2648886..2649638 (-) | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| BSU6051_RS13345 (BSU6051_25720) | yqeD | 2649825..2650451 (+) | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| BSU6051_RS13350 (BSU6051_25730) | gnd | 2650470..2651363 (-) | 894 | WP_003229961.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| BSU6051_RS13355 (BSU6051_25740) | yqeB | 2651615..2652337 (+) | 723 | WP_010886572.1 | hypothetical protein | - |
| BSU6051_RS13360 (BSU6051_25750) | nucA/comI | 2652370..2652780 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| BSU6051_RS13365 (BSU6051_25760) | - | 2652976..2653323 (+) | 348 | Protein_2701 | sigma-70 family RNA polymerase sigma factor | - |
| BSU6051_RS13370 (BSU6051_25770) | spoIVCA | 2653354..2654814 (-) | 1461 | WP_223257626.1 | site-specific DNA recombinase SpoIVCA | - |
| BSU6051_RS22845 | - | 2654772..2654950 (-) | 179 | Protein_2703 | hypothetical protein | - |
| BSU6051_RS13375 (BSU6051_25780) | arsC | 2655305..2655724 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| BSU6051_RS13380 (BSU6051_25790) | acr3 | 2655736..2656776 (-) | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| BSU6051_RS13385 (BSU6051_25800) | arsK | 2656799..2657239 (-) | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| BSU6051_RS13390 (BSU6051_25810) | arsR | 2657300..2657617 (-) | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| BSU6051_RS13395 (BSU6051_25820) | yqcI | 2657989..2658753 (-) | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| BSU6051_RS13400 (BSU6051_25830) | rapE | 2659196..2660323 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| BSU6051_RS13405 (BSU6051_25840) | phrE | 2660313..2660447 (+) | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| BSU6051_RS21925 (BSU6051_25850) | - | 2660557..2660715 (+) | 159 | WP_003245945.1 | hypothetical protein | - |
| BSU6051_RS13410 (BSU6051_25860) | yqcG | 2661085..2662680 (+) | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| BSU6051_RS13415 (BSU6051_25870) | yqcF | 2662695..2663273 (+) | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| BSU6051_RS22530 | - | 2663391..2663537 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| BSU6051_RS13420 (BSU6051_25880) | - | 2663534..2663896 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| BSU6051_RS13425 (BSU6051_25890) | - | 2663912..2664391 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
| BSU6051_RS13430 (BSU6051_25900) | cwlA | 2664556..2665374 (-) | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | - |
| BSU6051_RS13435 (BSU6051_25910) | skhD | 2665419..2665841 (-) | 423 | WP_003246208.1 | holin family protein | - |
| BSU6051_RS13440 (BSU6051_25920) | xepAK | 2665886..2666779 (-) | 894 | WP_003246010.1 | hypothetical protein | - |
| BSU6051_RS13445 (BSU6051_25930) | yqcE | 2666867..2667031 (-) | 165 | WP_003229944.1 | XkdX family protein | - |
| BSU6051_RS13450 (BSU6051_25940) | yqcD | 2667028..2667363 (-) | 336 | WP_009967793.1 | XkdW family protein | - |
| BSU6051_RS13455 (BSU6051_25950) | yqcC | 2667373..2668473 (-) | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| BSU6051_RS13460 (BSU6051_25960) | - | 2668476..2668748 (-) | 273 | WP_003229942.1 | hypothetical protein | - |
| BSU6051_RS13465 (BSU6051_25970) | yqcA | 2668745..2669323 (-) | 579 | WP_003229941.1 | YmfQ family protein | - |
| BSU6051_RS13470 (BSU6051_25980) | yqbT | 2669307..2670353 (-) | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| BSU6051_RS13475 (BSU6051_25990) | yqbS | 2670346..2670771 (-) | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| BSU6051_RS13480 (BSU6051_26000) | yqbR | 2670784..2671047 (-) | 264 | WP_003229938.1 | DUF2577 family protein | - |
| BSU6051_RS13485 (BSU6051_26010) | yqbQ | 2671044..2672024 (-) | 981 | WP_004398524.1 | hypothetical protein | - |
| BSU6051_RS13490 (BSU6051_26020) | yqbP | 2672037..2672696 (-) | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| BSU6051_RS13495 (BSU6051_26030) | yqbO | 2672689..2677446 (-) | 4758 | WP_003246092.1 | phage tail tape measure protein | - |
| BSU6051_RS21930 | - | 2677449..2677586 (-) | 138 | WP_003229934.1 | hypothetical protein | - |
| BSU6051_RS13500 (BSU6051_26039) | - | 2677628..2678077 (-) | 450 | WP_003229933.1 | phage portal protein | - |
| BSU6051_RS13505 (BSU6051_26050) | txpA | 2678223..2678402 (+) | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | - |
| BSU6051_RS22535 | bsrH | 2678782..2678871 (+) | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| BSU6051_RS13510 (BSU6051_26060) | yqbM | 2679125..2679568 (-) | 444 | WP_003229930.1 | phage tail tube protein | - |
| BSU6051_RS13515 (BSU6051_26075) | yqbK | 2679571..2680971 (-) | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| BSU6051_RS13520 (BSU6051_26089) | - | 2680972..2681163 (-) | 192 | WP_010886574.1 | hypothetical protein | - |
| BSU6051_RS13525 (BSU6051_26090) | yqbJ | 2681160..2681597 (-) | 438 | WP_003229927.1 | DUF6838 family protein | - |
| BSU6051_RS13530 (BSU6051_26100) | yqbI | 2681610..2682113 (-) | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| BSU6051_RS13535 (BSU6051_26110) | yqbH | 2682110..2682472 (-) | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| BSU6051_RS13540 (BSU6051_26120) | gkpG | 2682469..2682864 (-) | 396 | WP_004398566.1 | DUF3199 family protein | - |
| BSU6051_RS13545 (BSU6051_26130) | yqbF | 2682868..2683179 (-) | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| BSU6051_RS13550 (BSU6051_26140) | skdG | 2683190..2684125 (-) | 936 | WP_003229922.1 | phage major capsid protein | - |
| BSU6051_RS13555 (BSU6051_26150) | yqbD | 2684144..2685112 (-) | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| BSU6051_RS13560 (BSU6051_26160) | - | 2685145..2685798 (-) | 654 | WP_003229920.1 | hypothetical protein | - |
| BSU6051_RS13565 (BSU6051_26170) | yqbB | 2685839..2686756 (-) | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| BSU6051_RS13570 (BSU6051_26180) | yqbA | 2686753..2688285 (-) | 1533 | WP_004398894.1 | phage portal protein | - |
| BSU6051_RS13575 (BSU6051_26190) | stmB | 2688289..2689584 (-) | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| BSU6051_RS13580 (BSU6051_26200) | terS | 2689577..2690296 (-) | 720 | WP_003229916.1 | phage terminase small subunit | - |
| BSU6051_RS13585 (BSU6051_26210) | - | 2690364..2690828 (-) | 465 | WP_004398685.1 | hypothetical protein | - |
| BSU6051_RS13590 (BSU6051_26220) | yqaQ | 2690972..2691427 (-) | 456 | WP_004398775.1 | hypothetical protein | - |
| BSU6051_RS13595 (BSU6051_26230) | - | 2691625..2692554 (+) | 930 | WP_003229913.1 | hypothetical protein | - |
| BSU6051_RS13600 (BSU6051_26240) | yqaO | 2692628..2692834 (-) | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| BSU6051_RS13605 (BSU6051_26250) | yqaN | 2692916..2693344 (-) | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BSU6051_RS21940 (BSU6051_26259) | - | 2693440..2693589 (-) | 150 | WP_003229910.1 | hypothetical protein | - |
| BSU6051_RS13610 (BSU6051_26260) | sknM | 2693580..2694521 (-) | 942 | WP_075058863.1 | ATP-binding protein | - |
| BSU6051_RS13615 (BSU6051_26270) | yqaL | 2694403..2695080 (-) | 678 | WP_010886575.1 | DnaD domain protein | - |
| BSU6051_RS13620 (BSU6051_26280) | recT | 2695156..2696010 (-) | 855 | WP_003229907.1 | recombinase RecT | - |
| BSU6051_RS13625 (BSU6051_26290) | yqaJ | 2696013..2696972 (-) | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| BSU6051_RS13630 (BSU6051_26300) | - | 2697078..2697272 (-) | 195 | WP_003229905.1 | hypothetical protein | - |
| BSU6051_RS22540 | - | 2697232..2697405 (-) | 174 | WP_119123069.1 | hypothetical protein | - |
| BSU6051_RS13635 (BSU6051_26310) | sknH | 2697402..2697659 (-) | 258 | WP_003245994.1 | YqaH family protein | - |
| BSU6051_RS13640 (BSU6051_26320) | yqaG | 2697656..2698225 (-) | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| BSU6051_RS21945 (BSU6051_26330) | - | 2698299..2698439 (-) | 141 | WP_003229902.1 | hypothetical protein | - |
| BSU6051_RS13645 (BSU6051_26340) | yqaF | 2698469..2698699 (-) | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| BSU6051_RS13650 (BSU6051_26350) | sknR | 2698876..2699226 (+) | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=56585 BSU6051_RS13360 WP_009967785.1 2652370..2652780(-) (nucA/comI) [Bacillus subtilis subsp. subtilis 6051-HGW]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=56585 BSU6051_RS13360 WP_009967785.1 2652370..2652780(-) (nucA/comI) [Bacillus subtilis subsp. subtilis 6051-HGW]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |