Detailed information NTG0565760

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KH263_RS17710
• Genome accession: NZ_CP074685
• Coordinates: 3643590..3644735 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain VTX9
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3638590..3649735

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KH263_RS17690 (KH263_17690)	-	3639064..3639780 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
KH263_RS17695 (KH263_17695)	narK	3639878..3641068 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
KH263_RS17700 (KH263_17700)	argS	3641203..3642873 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
KH263_RS17705 (KH263_17705)	-	3642870..3643298 (-)	429	WP_003151069.1	DUF1934 family protein	-
KH263_RS17710 (KH263_17710)	rapF	3643590..3644735 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
KH263_RS17715 (KH263_17715)	-	3644719..3644838 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
KH263_RS17720 (KH263_17720)	speB	3644961..3645833 (-)	873	WP_003151054.1	agmatinase	-
KH263_RS17725 (KH263_17725)	speE	3645893..3646723 (-)	831	WP_003151052.1	spermidine synthase	-
KH263_RS17730 (KH263_17730)	-	3646923..3648995 (+)	2073	WP_003151050.1	transglycosylase domain-containing protein	-
KH263_RS17735 (KH263_17735)	-	3649019..3649450 (-)	432	WP_057080300.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=565760 KH263_RS17710 WP_017418708.1 3643590..3644735(+) (rapF) [Bacillus velezensis strain VTX9]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=565760 KH263_RS17710 WP_017418708.1 3643590..3644735(+) (rapF) [Bacillus velezensis strain VTX9]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533