Detailed information NTG0565742

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MKD47_RS22665
• Genome accession: NZ_CP092533
• Coordinates: 4673875..4674900 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain DS566-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4668875..4679900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKD47_RS22645 (MKD47_22635)	metJ	4670060..4670377 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MKD47_RS22650 (MKD47_22640)	yiiX	4670437..4671045 (+)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
MKD47_RS22655 (MKD47_22645)	rpmE	4671106..4671318 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MKD47_RS22660 (MKD47_22650)	priA	4671521..4673719 (+)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
MKD47_RS22665 (MKD47_22655)	cytR	4673875..4674900 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
MKD47_RS22670 (MKD47_22660)	ftsN	4674992..4675951 (+)	960	WP_000068847.1	cell division protein FtsN	-
MKD47_RS22675 (MKD47_22665)	hslV	4676044..4676574 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MKD47_RS22680 (MKD47_22670)	hslU	4676584..4677915 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MKD47_RS22685 (MKD47_22675)	menA	4677982..4678908 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MKD47_RS22690 (MKD47_22680)	rraA	4679001..4679486 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MKD47_RS22695 (MKD47_22685)	zapB	4679571..4679816 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=565742 MKD47_RS22665 WP_000644911.1 4673875..4674900(+) (cytR) [Escherichia coli strain DS566-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=565742 MKD47_RS22665 WP_000644911.1 4673875..4674900(+) (cytR) [Escherichia coli strain DS566-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625