Detailed information NTG0565670

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MKD47_RS00870
• Genome accession: NZ_CP092533
• Coordinates: 190171..191154 (+)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain DS566-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 185171..196154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKD47_RS00850 (MKD47_00850)	dppA	186315..187922 (+)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-
MKD47_RS00855 (MKD47_00855)	-	187984..188211 (-)	228	WP_000198576.1	hypothetical protein	-
MKD47_RS00860 (MKD47_00860)	dppB	188229..189248 (+)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
MKD47_RS00865 (MKD47_00865)	dppC	189258..190160 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MKD47_RS00870 (MKD47_00870)	amiE	190171..191154 (+)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
MKD47_RS00875 (MKD47_00875)	dppF	191151..192155 (+)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MKD47_RS00880 (MKD47_00880)	yhjV	192185..193456 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
MKD47_RS00885 (MKD47_00885)	ldrD	193932..194039 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MKD47_RS00890 (MKD47_00890)	bcsG	194126..195805 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MKD47_RS00895 (MKD47_00895)	bcsF	195802..195993 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=565670 MKD47_RS00870 WP_001540025.1 190171..191154(+) (amiE) [Escherichia coli strain DS566-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=565670 MKD47_RS00870 WP_001540025.1 190171..191154(+) (amiE) [Escherichia coli strain DS566-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404