Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KIM99_RS15805 Genome accession   NZ_CP074677
Coordinates   3203397..3203993 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain MEI009     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3198397..3208993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIM99_RS15790 (KIM99_15770) helD 3198605..3200659 (-) 2055 WP_009308304.1 DNA helicase IV -
  KIM99_RS15795 (KIM99_15775) - 3200784..3201230 (+) 447 WP_119735200.1 YccF domain-containing protein -
  KIM99_RS15800 (KIM99_15780) yccS 3201248..3203383 (+) 2136 WP_009308302.1 YccS family putative transporter -
  KIM99_RS15805 (KIM99_15785) sxy/tfoX 3203397..3203993 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  KIM99_RS15810 (KIM99_15790) sulA 3204342..3204851 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  KIM99_RS15815 (KIM99_15795) ompA 3205204..3206274 (+) 1071 WP_002898408.1 porin OmpA -
  KIM99_RS15820 (KIM99_15800) matP 3206406..3206858 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KIM99_RS15825 (KIM99_15805) - 3207044..3208801 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=565658 KIM99_RS15805 WP_004179217.1 3203397..3203993(-) (sxy/tfoX) [Klebsiella pneumoniae strain MEI009]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=565658 KIM99_RS15805 WP_004179217.1 3203397..3203993(-) (sxy/tfoX) [Klebsiella pneumoniae strain MEI009]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGTTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51