Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BSU6051_RS07595 Genome accession   NC_020507
Coordinates   1493785..1494360 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis 6051-HGW     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1488785..1499360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSU6051_RS07565 (BSU6051_14180) dapD 1488971..1489681 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BSU6051_RS07570 (BSU6051_14190) dapI 1489751..1490875 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  BSU6051_RS07575 (BSU6051_14200) ykuS 1490937..1491182 (+) 246 WP_003232382.1 YkuS family protein -
  BSU6051_RS07580 (BSU6051_14210) mscT 1491219..1492022 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BSU6051_RS07585 (BSU6051_14220) ahpA 1492259..1492801 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BSU6051_RS07590 (BSU6051_14230) ykuV 1492873..1493319 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  BSU6051_RS07595 (BSU6051_14240) rok 1493785..1494360 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  BSU6051_RS07600 (BSU6051_14250) cse15 1494401..1495366 (-) 966 WP_003245018.1 spore protein Cse15 -
  BSU6051_RS07605 (BSU6051_14260) mobA 1495503..1496102 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  BSU6051_RS07610 (BSU6051_14270) moeB 1496153..1497172 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  BSU6051_RS07615 (BSU6051_14280) glp 1497190..1498482 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  BSU6051_RS07620 (BSU6051_14290) mobB 1498443..1498964 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=56563 BSU6051_RS07595 WP_003232378.1 1493785..1494360(+) (rok) [Bacillus subtilis subsp. subtilis 6051-HGW]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=56563 BSU6051_RS07595 WP_003232378.1 1493785..1494360(+) (rok) [Bacillus subtilis subsp. subtilis 6051-HGW]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment